Evidence map›Paper›PMID 38615146›Full record

ArticleScientific reports2024

A role for the stringent response in ciprofloxacin resistance in Pseudomonas aeruginosa.

Libertad García-Villada, Natalya P Degtyareva, Ashley M Brooks, Joanna B Goldberg, Paul W Doetsch

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Structural and Computational Analysis ofbioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Libertad García-VilladaGenomic Integrity and Structural Biology Laboratory, NIEHS, Durham, NC, USA.ORCID 0000-0001-9796-9341
Natalya P DegtyarevaGenomic Integrity and Structural Biology Laboratory, NIEHS, Durham, NC, USA.ORCID 0000-0002-7141-6308
Ashley M BrooksIntegrative Bioinformatics, Biostatistics and Computational Biology Branch, NIEHS, Durham, NC, USA.ORCID 0000-0003-2242-5942
Joanna B GoldbergDepartment of Pediatrics, Emory University School of Medicine, Atlanta, GA, USA.ORCID 0000-0002-5285-5188
Paul W DoetschGenomic Integrity and Structural Biology Laboratory, NIEHS, Durham, NC, USA. paul.doetsch@nih.gov.ORCID 0000-0003-3195-3413
National Institute of Environmental Health Sciences · USEmory University · US

Funding

Mechanisms of transcriptional and replicative mutagenesisZIAES103328 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI DOETSCH, PAUL · 2018 to 2025
$10.5M
NIH HHS Z1AES103328
6 · The paper itself

Abstract

Pseudomonas aeruginosa is a major cause of nosocomial infections and the leading cause of chronic lung infections in cystic fibrosis and chronic obstructive pulmonary disease patients. Antibiotic treatment remains challenging because P. aeruginosa is resistant to high concentrations of antibiotics and has a remarkable ability to acquire mutations conferring resistance to multiple groups of antimicrobial agents. Here we report that when P. aeruginosa is plated on ciprofloxacin (cipro) plates, the majority of cipro-resistant (ciproR) colonies observed at and after 48 h of incubation carry mutations in genes related to the Stringent Response (SR). Mutations in one of the major SR components, spoT, were present in approximately 40% of the ciproR isolates. Compared to the wild-type strain, most of these isolates had decreased growth rate, longer lag phase and altered intracellular ppGpp content. Also, 75% of all sequenced mutations were insertions and deletions, with short deletions being the most frequently occurring mutation type. We present evidence that most of the observed mutations are induced on the selective plates in a subpopulation of cells that are not instantly killed by cipro. Our results suggests that the SR may be an important contributor to antibiotic resistance acquisition in P. aeruginosa.

Indexed as

CiprofloxacinPseudomonas InfectionsAnti-Bacterial AgentsBone PlatesHumansPseudomonas aeruginosaAnti-Bacterial AgentsCiprofloxacin

Identifiers

PMID38615146
PMCPMC11016087
OpenAlexW4394786250

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.