Evidence map›Paper›PMID 38614085›Full record

ArticleCell reports2024

Distributed X chromosome inactivation in brain circuitry is associated with X-linked disease penetrance of behavior.

Eric R Szelenyi, Danielle Fisenne, Joseph E Knox, Julie A Harris, James A Gornet, Ramesh Palaniswamy, Yongsoo Kim, Kannan Umadevi Venkataraju, Pavel Osten

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  3. Review
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  8. An arginine-rich nuclear localization signal (ArgiNLS) strategy for streamlined image segmentation of single cells.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Eric R SzelenyiCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Program in Neuroscience, Stony Brook University, Neurobiology and Behavior, Stony Brook, NY 11794, USA. Electronic address: szelenyi@uw.edu.
Danielle FisenneCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Hofstra University, Hempstead, NY 11549, USA; Certerra, Inc., Farmingdale, NY 11735, USA.
Joseph E KnoxAllen Institute for Brain Science, Seattle, WA 98109, USA.
Julie A HarrisAllen Institute for Brain Science, Seattle, WA 98109, USA.
James A GornetCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Columbia University, New York, NY 10027, USA.
Ramesh PalaniswamyCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Yongsoo KimCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; College of Medicine, Penn State University, Hershey, PA 17033, USA.
Kannan Umadevi VenkatarajuCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Pavel OstenCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Cold Spring Harbor Laboratory · USAllen Institute for Brain Science · USHofstra University · US

Funding

Towards quantitative cell type-based mapping of the whole mouse brainU01MH105971 · NIMH · COLD SPRING HARBOR LABORATORY · PI OSTEN, PAVEL · 2014 to 2016
$3.9M
Establishing Common Coordinate Framework for Quantitative Cell Census in Developing Mouse BrainsRF1MH124605 · NIMH · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI GEE, JAMES C, KIM, YONGSOO · 2020 to 2020
$3.8M
Cell adhesion molecules in autism: a whole-brain study of genetic mouse modelsR01MH096946 · NIMH · COLD SPRING HARBOR LABORATORY · PI OSTEN, PAVEL · 2012 to 2016
$2.4M
Brain-wide input and output wiring diagram of oxytocin neurons and its function in claustrum-endopiriform complexR01MH116176 · NIMH · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI KIM, YONGSOO · 2018 to 2022
$2.4M
NIMH NIH HHS R01 MH096946NIMH NIH HHS R01 MH116176NIMH NIH HHS RF1 MH124605NIMH NIH HHS U01 MH105971
6 · The paper itself

Abstract

The precise anatomical degree of brain X chromosome inactivation (XCI) that is sufficient to alter X-linked disorders in females is unclear. Here, we quantify whole-brain XCI at single-cell resolution to discover a prevalent activation ratio of maternal to paternal X at 60:40 across all divisions of the adult brain. This modest, non-random XCI influences X-linked disease penetrance: maternal transmission of the fragile X mental retardation 1 (Fmr1)-knockout (KO) allele confers 55% of total brain cells with mutant X-active, which is sufficient for behavioral penetrance, while 40% produced from paternal transmission is tolerated. Local XCI mosaicism within affected maternal Fmr1-KO mice further specifies sensorimotor versus social anxiety phenotypes depending on which distinct brain circuitry is most affected, with only a 50%-55% mutant X-active threshold determining penetrance. Thus, our results define a model of X-linked disease penetrance in females whereby distributed XCI among single cells populating brain circuitries can regulate the behavioral penetrance of an X-linked mutation.

Indexed as

BrainMice, KnockoutPenetranceX Chromosome InactivationAnimalsBehavior, AnimalFemaleFragile X Messenger Ribonucleoprotein 1Genetic Diseases, X-LinkedMaleMiceMice, Inbred C57BLMosaicismFmr1 protein, mouseFragile X Messenger Ribonucleoprotein 1circuitsCP: Neurosciencediseasepenetrancesingle-cellwhole-brainXCIX linked

Identifiers

PMID38614085
PMCPMC11107803
OpenAlexW4394748780

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.