Evidence map›Paper›PMID 38613682›Full record

ArticleAnalytical and bioanalytical chemistry2024

A sensitive fluorescence biosensor based on ligation-transcription and CRISPR/Cas13a-assisted cascade amplification strategies to detect the H1N1 virus.

Lulu Xue, Shengjun Bu, Mengyao Xu, Jiaqi Wei, Hongyu Zhou, Yao Xu, Zhuo Hao, Zehong Li, Jiayu Wan

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Article in Analytical and bioanalytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. CRISPR/Cas system and its application in the diagnosis of animal infectious diseases.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2024
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lulu XueCollege of Life Science, Jilin Agricultural University, Changchun, 130118, China.
Shengjun BuChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China.
Mengyao XuCollege of Life Science, Jilin Agricultural University, Changchun, 130118, China.
Jiaqi WeiChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China.
Hongyu ZhouChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China.
Yao XuCollege of Life Science, Jilin Agricultural University, Changchun, 130118, China.
Zhuo HaoChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China.
Zehong LiCollege of Life Science, Jilin Agricultural University, Changchun, 130118, China. 554233128@qq.com.
Jiayu WanChangchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun, 130122, China. wanjiayu@hotmail.com.

Funding

Jilin Provincial Scientific and Technological Development Program 20230203143SF
6 · The paper itself

Abstract

We propose a sensitive H1N1 virus fluorescence biosensor based on ligation-transcription and CRISPR/Cas13a-assisted cascade amplification strategies. Products are generated via the hybridization of single-stranded DNA (ssDNA) probes containing T7 promoter and crRNA templates to a target RNA sequence using SplintR ligase. This generates large crRNA quantities in the presence of T7 RNA polymerase. At such crRNA quantities, ternary Cas13a, crRNA, and activator complexes are successfully constructed and activate Cas13a to enhance fluorescence signal outputs. The biosensor sensitively and specifically monitored H1N1 viral RNA levels down to 3.23 pM and showed good linearity when H1N1 RNA concentrations were 100 pM-1 µM. Biosensor specificity was also excellent. Importantly, our biosensor may be used to detect other viral RNAs by altering the sequences of the two probe junctions, with potential applications for the clinical diagnosis of viruses and other biomedical studies.

Indexed as

Biosensing TechniquesCRISPR-Cas SystemsInfluenza A Virus, H1N1 SubtypeRNA, ViralFluorescenceHumansLimit of DetectionNucleic Acid Amplification TechniquesTranscription, GeneticRNA, ViralCRISPR/Cas13aH1N1 virusSplintR ligaseT7 RNA polymerase

Identifiers

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.