Evidence map›Paper›PMID 38611599›Full record

ArticleDiagnostics (Basel, Switzerland)2024

Menstrual Blood as a Diagnostic Specimen for Human Papillomavirus Genotyping and Genital Tract Infection Using Next-Generation Sequencing as a Novel Diagnostic Tool.

Hin-Fung Tsang, Yui-Shing Cheung, Chi-Shing Allen Yu, Chung-Sum Sammy Chan, Chi-Bun Thomas Wong, Kay-Yuen Aldrin Yim, Xiaomeng Pei, Sze-Chuen Cesar Wong

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 2 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 syntheses or guidelines pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Hin-Fung TsangDepartment of Clinical Laboratory and Pathology, Hong Kong Adventist Hospital, Hong Kong SAR, China.
Yui-Shing CheungDepartment of Obstetrics and Gynaecology, Queen Elizabeth Hospital, Hong Kong SAR, China.ORCID 0009-0003-9643-0506
Chi-Shing Allen YuCodex Genetics Limited, Hong Kong SAR, China.ORCID 0000-0002-9568-8316
Chung-Sum Sammy ChanDepartment of Obstetrics and Gynaecology, Queen Elizabeth Hospital, Hong Kong SAR, China.
Chi-Bun Thomas WongCodex Genetics Limited, Hong Kong SAR, China.
Kay-Yuen Aldrin YimCodex Genetics Limited, Hong Kong SAR, China.
Xiaomeng PeiDepartment of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hong Kong SAR, China.
Sze-Chuen Cesar WongDepartment of Applied Biology & Chemical Technology, The Hong Kong Polytechnic University, Hong Kong SAR, China.
Hong Kong Polytechnic University · HKQueen Elizabeth Hospital · CNHong Kong Adventist Hospital · CN

Funding

HK Innovation and Technology Fund University-Industry Collaborative Programme UIM/354Research Grants Council HK RGCQ71P
6 · The paper itself

Abstract

backgroundMenstrual blood (MB) is a convenient specimen type that can be self-collected easily and non-invasively by women. This study assessed the potential application of MB as a diagnostic specimen to detect genital tract infections (GTIs) and human papillomavirus (HPV) infections in women.

methodGenomic DNA was extracted from MB samples. Pacific Bioscience (Pacbio) 16S ribosomal DNA (rDNA) high-fidelity (HiFi) long-read sequencing and HPV PCR were performed.

resultsMB samples were collected from women with a pathological diagnosis of CIN1, CIN2, CIN3 or HPV infection. The sensitivity and positive predictive value (PPV) of high-risk HPV detection using MB were found to be 66.7%. A shift in vaginal flora and a significant depletion in

conclusionsIn this study, we demonstrated that MB is a proper diagnostic specimen of consideration for non-invasive detection of HPV DNA and genotyping using PCR and the diagnosis of GTIs using metagenomic next-generation sequencing (mNGS). MB testing is suitable for all women who menstruate and this study has opened up the possibility of the use of MB as a diagnostic specimen to maintain women's health.

Indexed as

16S rRNAcervical cancer screeninggenital tract infectionHPVhuman papillomavirusmenstrual bloodmetagenomic next-generation sequencing

Identifiers

PMID38611599
PMCPMC11012019
OpenAlexW4393141719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.