Evidence map›Paper›PMID 38609708›Full record

ArticleAnalytical sciences : the international journal of the Japan Society for Analytical Chemistry2024

Biotinylated cyclic naphthalene diimide as a searching tool for G4 sites on the genome.

Satoshi Fujii, Shinobu Sato, Ryuki Hidaka, Shigeori Takenaka

Open access · hybridAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Analytical sciences : the international journal of the Japan Society for Analytical Chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Small-molecule-based CUT&RUN for G-quadruplex DNA using a cyclic naphthalene diimide-copper complex.Analytical sciences : the international journal of the Japan Society for Analytical Chemistry · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Satoshi FujiiDepartment of Bioscience and Bioinformatics, Kyushu Institute of Technology, 680-4 Kawazu, Iizuka-Shi, Fukuoka, 820-8502, Japan. sfujii@bio.kyutech.ac.jp.ORCID http://orcid.org/0000-0002-3341-8644
Shinobu SatoDepartment of Applied Chemistry, Kyushu Institute of Technology, 1-1 Sensui-Cho, Tobata-Ku, Kitakyushu-Shi, Fukuoka, 804-8550, Japan. shinobu@che.kyutech.ac.jp.ORCID http://orcid.org/0000-0002-3813-0535
Ryuki HidakaDepartment of Applied Chemistry, Kyushu Institute of Technology, 1-1 Sensui-Cho, Tobata-Ku, Kitakyushu-Shi, Fukuoka, 804-8550, Japan.
Shigeori TakenakaDepartment of Applied Chemistry, Kyushu Institute of Technology, 1-1 Sensui-Cho, Tobata-Ku, Kitakyushu-Shi, Fukuoka, 804-8550, Japan.ORCID http://orcid.org/0000-0003-3819-7673
Kyushu Institute of Technology · JP

Funding

Japan Society for the Promotion of Science 21K05114Japan Society for the Promotion of Science 23H01988
6 · The paper itself

Abstract

A biotinyl cyclic naphthalene diimide (biotinyl cNDI) (1), in which biotin is introduced on the cyclic linker chain of cNDI with high G-quadruplex (G4) specificity, was synthesized. 1 was used for binding analysis to G4 DNAs such as c-myc, c-kit, CEGF, or TA-core. The results showed that 1 bind to G4 DNAs with high affinity and, especially, two molecules of 1 bind to c-myc DNA from top and bottom of G4 site at K = 3.9 × 10

Indexed as

BiotinDNAG-QuadruplexesImidesNaphthalenesBiotinylationHumansBiotinDNAImidesnaphthalenediimideNaphthalenesCyclic naphthalene diimide (cNDI)G-quadruplexIsothermal titration calorimetry (ITC)Pulldown assayQuantitative polymerase chain reaction (qPCR)

Identifiers

PMID38609708
PMCPMC11035424
OpenAlexW4394745649

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.