Evidence map›Paper›PMID 38609519›Full record

ArticleExperimental & molecular medicine2024

Central neurocytoma exhibits radial glial cell signatures with FGFR3 hypomethylation and overexpression.

Yeajina Lee, Tamrin Chowdhury, Sojin Kim, Hyeon Jong Yu, Kyung-Min Kim, Ho Kang, Min-Sung Kim, Jin Wook Kim, Yong-Hwy Kim, So Young Ji and 13 more

Open access · goldAbstract read
In one paragraph

Article in Experimental & molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 6 institutions in 3 countries.

Yeajina Lee *Department of Biomedical Sciences, Seoul National University Graduate School, Seoul, Republic of Korea.
Tamrin Chowdhury *Department of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Sojin KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Hyeon Jong YuDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Kyung-Min KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Ho KangDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Min-Sung KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Jin Wook KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Yong-Hwy KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
So Young JiDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea.
Kihwan HwangDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea.
Jung Ho HanDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea.
Jinha HwangDepartment of Laboratory Medicine, Korea University Anam Hospital, Seoul, Republic of Korea.
Seong-Keun YooThe Marc and Jennifer Lipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.ORCID http://orcid.org/0000-0002-8749-7050
Kyu Sang LeeDepartment of Pathology, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea.
Gheeyoung ChoeDepartment of Pathology, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea.
Jae-Kyung WonDepartment of Pathology, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.
Sung-Hye ParkDepartment of Pathology, Seoul National University College of Medicine, Seoul National University Hospital, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-8681-1597
Yong Kyu LeeLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, 21205, USA.ORCID http://orcid.org/0000-0001-6427-0219
Joo Heon ShinLieber Institute for Brain Development, Johns Hopkins Medical Campus, Baltimore, MD, 21205, USA.ORCID http://orcid.org/0000-0002-5563-8605
Chul-Kee ParkGenomic Medicine Institute, Medical Research Center, Seoul National University, Seoul, Republic of Korea. nsckpark@snu.ac.kr.ORCID http://orcid.org/0000-0002-2350-9876
Chae-Yong KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul National University Bundang Hospital, Seongnam-si, Gyeonggi-do, Republic of Korea. chaeyong@snu.ac.kr.
Jong-Il KimDepartment of Biomedical Sciences, Seoul National University Graduate School, Seoul, Republic of Korea. jongil@snu.ac.kr.ORCID http://orcid.org/0000-0002-7240-3744
Seoul National University Hospital · KRSeoul National University Bundang Hospital · KRSeoul National University · KRIcahn School of Medicine at Mount Sinai · USJohns Hopkins University · USKorea University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We explored the genomic events underlying central neurocytoma (CN), a rare neoplasm of the central nervous system, via multiomics approaches, including whole-exome sequencing, bulk and single-nuclei RNA sequencing, and methylation sequencing. We identified FGFR3 hypomethylation leading to FGFR3 overexpression as a major event in the ontogeny of CN that affects crucial downstream events, such as aberrant PI3K-AKT activity and neuronal development pathways. Furthermore, we found similarities between CN and radial glial cells based on analyses of gene markers and CN tumor cells and postulate that CN tumorigenesis is due to dysregulation of radial glial cell differentiation into neurons. Our data demonstrate the potential role of FGFR3 as one of the leading drivers of tumorigenesis in CN.

Indexed as

DNA MethylationEpendymoglial CellsNeurocytomaReceptor, Fibroblast Growth Factor, Type 3Gene Expression Regulation, NeoplasticHumansFGFR3 protein, humanReceptor, Fibroblast Growth Factor, Type 3

Identifiers

PMID38609519
PMCPMC11059271
OpenAlexW4394766032

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.