Evidence map›Paper›PMID 38608038›Full record

ArticleScience immunology2024

Genome-wide screening identifies Trim33 as an essential regulator of dendritic cell differentiation.

Ioanna Tiniakou, Pei-Feng Hsu, Lorena S Lopez-Zepeda, Görkem Garipler, Eduardo Esteva, Nicholas M Adams, Geunhyo Jang, Chetna Soni, Colleen M Lau, Fan Liu and 10 more

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 2 countries.

Ioanna TiniakouDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0002-8429-7045
Pei-Feng HsuDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0001-9749-7591
Lorena S Lopez-ZepedaDepartment of Biology, Humboldt Universität zu Berlin, Berlin, Germany.ORCID 0000-0001-9764-0984
Görkem GariplerDepartment of Biology, New York University, New York, NY, USA.
Eduardo EstevaDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0002-7223-6632
Nicholas M AdamsDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0001-5751-0480
Geunhyo JangDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0002-9824-1480
Chetna SoniDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0001-7800-2338
Colleen M LauDepartment of Microbiology and Immunology, Cornell University College of Veterinary Medicine, Ithaca, NY, USA.ORCID 0000-0001-7538-094X
Fan LiuDepartment of Biochemistry and Molecular Biology, Department of Medicine and Sylvester Comprehensive Cancer Center, University of Miami, Miller School of Medicine, Miami, FL, USA.
Alireza Khodadadi-JamayranDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0003-2495-7504
Tori C RodrickMetabolomics Laboratory, Department of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY, USA.
Drew JonesMetabolomics Laboratory, Department of Biochemistry and Molecular Pharmacology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0001-8732-9818
Aristotelis TsirigosDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0002-7512-8477
Uwe OhlerDepartment of Biology, Humboldt Universität zu Berlin, Berlin, Germany.ORCID 0000-0002-0881-3116
Mark T BedfordDepartment of Epigenetics and Molecular Carcinogenesis, University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID 0000-0002-8899-1050
Stephen D NimerDepartment of Biochemistry and Molecular Biology, Department of Medicine and Sylvester Comprehensive Cancer Center, University of Miami, Miller School of Medicine, Miami, FL, USA.ORCID 0000-0003-2439-7586
Vesa KaartinenDepartment of Biologic and Materials Sciences, University of Michigan School of Dentistry, Ann Arbor, MI, USA.ORCID 0000-0002-9432-510X
Esteban O MazzoniDepartment of Biology, New York University, New York, NY, USA.ORCID 0000-0001-8994-681X
Boris ReizisDepartment of Pathology, New York University Grossman School of Medicine, New York, NY, USA.ORCID 0000-0003-1140-7853
New York University · USMax Delbrück Center · DESylvester Comprehensive Cancer Center · USCornell University · USThe University of Texas MD Anderson Cancer Center · USUniversity of Michigan · US

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Molecular Control of Plasmacytoid Dendritic Cell Development and FunctionR37AI072571 · NIAID · UNIVERSITY OF CHICAGO · PI Boris Reizis · 2018 to 2026
$5.3M
Molecular Control of Plasmacytoid Dendritic Cell Development and FunctionR01AI072571 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REIZIS, BORIS · 2008 to 2017
$4.1M
The Functional Analysis of the Coactivator CARM1R01GM126421 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BEDFORD, MARK T. · 2018 to 2021
$1.4M
A novel regulator of dendritic cell differentiationR21AI154864 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REIZIS, BORIS · 2020 to 2021
$466k
NCI NIH HHS P30 CA016087NIAID NIH HHS R01 AI072571NIAID NIH HHS R21 AI154864NIAID NIH HHS R37 AI072571NIGMS NIH HHS R01 GM126421
6 · The paper itself

Abstract

The development of dendritic cells (DCs), including antigen-presenting conventional DCs (cDCs) and cytokine-producing plasmacytoid DCs (pDCs), is controlled by the growth factor Flt3 ligand (Flt3L) and its receptor Flt3. We genetically dissected Flt3L-driven DC differentiation using CRISPR-Cas9-based screening. Genome-wide screening identified multiple regulators of DC differentiation including subunits of TSC and GATOR1 complexes, which restricted progenitor growth but enabled DC differentiation by inhibiting mTOR signaling. An orthogonal screen identified the transcriptional repressor Trim33 (TIF-1γ) as a regulator of DC differentiation. Conditional targeting in vivo revealed an essential role of Trim33 in the development of all DCs, but not of monocytes or granulocytes. In particular, deletion of Trim33 caused rapid loss of DC progenitors, pDCs, and the cross-presenting cDC1 subset. Trim33-deficient Flt3

Indexed as

ChoreaCell DifferentiationCytokinesDendritic CellsTranscription FactorsCytokinesTranscription FactorsTrim33 protein, mouse

Identifiers

PMID38608038
PMCPMC11182672
OpenAlexW4394769704

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.