Evidence map›Paper›PMID 38607288›Full record

ArticleNano letters2024

Size Sensitivity of Metabolite Diffusion in Macromolecular Crowds.

Edyta Raczyłło, Dariusz Gołowicz, Tomasz Skóra, Krzysztof Kazimierczuk, Svyatoslav Kondrat

Abstract read
In one paragraph

Article in Nano letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Edyta RaczyłłoInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.ORCID 0000-0003-0993-2683
Dariusz GołowiczInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.ORCID 0000-0002-3602-4069
Tomasz SkóraInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.ORCID 0000-0003-4394-4928
Krzysztof KazimierczukCentre of New Technologies, University of Warsaw, 02-097 Warsaw, Poland.ORCID 0000-0001-9585-1737
Svyatoslav KondratInstitute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland.ORCID 0000-0003-4448-0686

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolites play crucial roles in cellular processes, yet their diffusion in the densely packed interiors of cells remains poorly understood, compounded by conflicting reports in existing studies. Here, we employ pulsed-gradient stimulated-echo NMR and Brownian/Stokesian dynamics simulations to elucidate the behavior of nano- and subnanometer-sized tracers in crowded environments. Using Ficoll as a crowder, we observe a linear decrease in tracer diffusivity with increasing occupied volume fraction, persisting─somewhat surprisingly─up to volume fractions of 30-40%. While simulations suggest a linear correlation between diffusivity slowdown and particle size, experimental findings hint at a more intricate relationship, possibly influenced by Ficoll's porosity. Simulations and numerical calculations of tracer diffusivity in the

Indexed as

intracellular diffusionmacromolecular crowdingmetabolitesnanoviscositysize dependenceStokes−Sutherland−Einstein relation

Identifiers

PMID38607288
PMCPMC11057039

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.