Evidence map›Paper›PMID 38606629›Full record

ArticleJournal of cell science2024

Mapping the global interactome of the ARF family reveals spatial organization in cellular signaling pathways.

Laura Quirion, Amélie Robert, Jonathan Boulais, Shiying Huang, Gabriela Bernal Astrain, Regina Strakhova, Chang Hwa Jo, Yacine Kherdjemil, Denis Faubert, Marie-Pier Thibault and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of cell science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. The small GTPase MRAS is a broken switch.Nature communications · 2025
    Article
  8. Arfs on the Golgi: four conductors, one orchestra.Frontiers in molecular biosciences · 2025
    Review
  9. Review
  10. Article
  11. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Laura QuirionMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0001-9871-2943
Amélie RobertMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0002-0164-1534
Jonathan BoulaisMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0003-1848-0068
Shiying HuangDepartment of Chemistry and Chemical Biology and Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853, USA.
Gabriela Bernal AstrainMolecular Biology Programs, Université de Montréal, Montréal, QC H3T 1J4, Canada.
Regina StrakhovaMolecular Biology Programs, Université de Montréal, Montréal, QC H3T 1J4, Canada.ORCID 0009-0009-2861-1747
Chang Hwa JoInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, QC H3T 1J4, Canada.
Yacine KherdjemilMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0003-4628-710X
Denis FaubertMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.
Marie-Pier ThibaultMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.
Marie KmitaMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0003-4021-0478
Jeremy M BaskinDepartment of Chemistry and Chemical Biology and Weill Institute for Cell and Molecular Biology, Cornell University, Ithaca, NY 14853, USA.ORCID 0000-0003-2939-3138
Anne-Claude GingrasLunenfeld-Tanenbaum Research Institute, Sinai Health System, Toronto, ON M5G 1X5, Canada.ORCID 0000-0002-6090-4437
Matthew J SmithInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, QC H3T 1J4, Canada.
Jean-François CôtéMontreal Clinical Research Institute (IRCM), Montréal, QC H2W 1R7, Canada.ORCID 0000-0001-7055-2642
Montreal Clinical Research Institute · CAInstitute for Research in Immunology and Cancer · CACornell University · USUniversity of Toronto · CA

Funding

Training future leaders at the chemistry-biology interfaceT32GM138826 · NIGMS · CORNELL UNIVERSITY · PI Jeremy Baskin · 2021 to 2026
$2.6M
Deciphering phosphatidic acid homeostasis and signaling using optogenetic membrane editors (Equipment Supplement 2024)R01GM151682 · NIGMS · CORNELL UNIVERSITY · PI Jeremy Baskin · 2023 to 2026
$1.6M
CIHR PJT-178241NCATS NIH HHS R01GM151682NCATS NIH HHS T32GM138826NIGMS NIH HHS R01 GM151682NIGMS NIH HHS T32 GM138826NIH HHS
6 · The paper itself

Abstract

The ADP-ribosylation factors (ARFs) and ARF-like (ARL) GTPases serve as essential molecular switches governing a wide array of cellular processes. In this study, we used proximity-dependent biotin identification (BioID) to comprehensively map the interactome of 28 out of 29 ARF and ARL proteins in two cellular models. Through this approach, we identified ∼3000 high-confidence proximal interactors, enabling us to assign subcellular localizations to the family members. Notably, we uncovered previously undefined localizations for ARL4D and ARL10. Clustering analyses further exposed the distinctiveness of the interactors identified with these two GTPases. We also reveal that the expression of the understudied member ARL14 is confined to the stomach and intestines. We identified phospholipase D1 (PLD1) and the ESCPE-1 complex, more precisely, SNX1, as proximity interactors. Functional assays demonstrated that ARL14 can activate PLD1 in cellulo and is involved in cargo trafficking via the ESCPE-1 complex. Overall, the BioID data generated in this study provide a valuable resource for dissecting the complexities of ARF and ARL spatial organization and signaling.

Indexed as

ADP-Ribosylation FactorsPhospholipase DSignal TransductionAnimalsHEK293 CellsHumansProtein Interaction MappingSorting NexinsADP-Ribosylation FactorsPhospholipase DSorting NexinsARF GTPasesARF-like GTPases, ARLsBioID proteomicsEffector proteinsESCPE-1PLD1

Identifiers

PMID38606629
PMCPMC11166204
OpenAlexW4394762731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.