Evidence map›Paper›PMID 38606065›Full record

ArticleFrontiers in plant science2024

Integrative transcript to proteome analysis of barley during

René Lemcke, Manoj Kamble, Sebastian Schneider, Michael F Lyngkjær, Simona Radutoiu, Stefanie Wienkoop

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

René LemckeDepartment of Plant and Environmental Sciences, Copenhagen University, Frederiksberg, Denmark.
Manoj KambleDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Sebastian SchneiderDepartment of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria.
Michael F LyngkjærDepartment of Plant and Environmental Sciences, Copenhagen University, Frederiksberg, Denmark.
Simona RadutoiuDepartment of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark.
Stefanie WienkoopDepartment of Functional and Evolutionary Ecology, University of Vienna, Vienna, Austria.
Aarhus University · DKUniversity of Copenhagen · DKUniversity of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Methods: Utilizing the strength of proteomics in understanding plant-pathogen interactions, we performed an integrative analysis of a published transcriptome dataset with a parallel generated proteome dataset. Therefore, we included two spring barley cultivars with contrasting susceptibilities to Results: Interestingly, early responses in the pathogen recognition phase of the host were driven by strong responses differing between isolates. An important enzyme in this process is a xylanase inhibitor, which protected the plant from cell wall degradation by the fungal xylanase. At later time points, the differences were driven by cultivar-specific responses, affecting mostly features contributing to the pathogenesis- and senescence-related pathways or photosynthesis. Discussion: This supports the hypothesis of a hemibiotrophic lifestyle of

Indexed as

fungusHordeum vulgarepathogenesis related (PR) proteinspathogen infectiontranscript to protein

Identifiers

PMID38606065
PMCPMC11007159
OpenAlexW4393276559

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.