Evidence map›Paper›PMID 38605225›Full record

ArticleThe EMBO journal2024

Accelerated plasma-cell differentiation in Bach2-deficient mouse B cells is caused by altered IRF4 functions.

Kyoko Ochiai, Hiroki Shima, Toru Tamahara, Nao Sugie, Ryo Funayama, Keiko Nakayama, Tomohiro Kurosaki, Kazuhiko Igarashi

Open access · diamondAbstract read
In one paragraph

Article in The EMBO journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
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  5. Tripartite motif containing 21 autoimmunity primes CD8Arthritis research & therapy · 2026
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  6. Epstein-Barr virus (EBV) infection causes human germinal center B cell-derived lymphomas in the absence of EBNA2 expression.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Kyoko OchiaiDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan. kochiai@med.tohoku.ac.jp.ORCID http://orcid.org/0000-0002-2504-2157
Hiroki ShimaDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan.
Toru TamaharaDivision of Community Oral Health Science, Department of Community Medical Supports, Tohoku Medical Megabank Organization, Tohoku University, Seiryo-machi 2-1, Sendai, 980-8573, Japan.ORCID http://orcid.org/0000-0003-1640-7094
Nao SugieDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan.
Ryo FunayamaDivision of Cell Proliferation, United Centers for Advanced Research and Translational Medicine, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan.
Keiko NakayamaDivision of Cell Proliferation, United Centers for Advanced Research and Translational Medicine, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan.
Tomohiro KurosakiLaboratory of Lymphocyte Differentiation, Immunology Frontier Research Center, Osaka University, Osaka, 565-0871, Japan.
Kazuhiko IgarashiDepartment of Biochemistry, Tohoku University Graduate School of Medicine, Seiryo-machi 2-1, Sendai, 980-8575, Japan. igarashi@med.tohoku.ac.jp.ORCID http://orcid.org/0000-0002-2470-2475
Tohoku University · JPRIKEN Center for Integrative Medical Sciences · JP

Funding

Japan Agency for Medical Research and Development (AMED) 16gm050001MEXT | Japan Society for the Promotion of Science (JSPS) 16K19026MEXT | Japan Society for the Promotion of Science (JSPS) 18H04021MEXT | Japan Society for the Promotion of Science (JSPS) 20K07321MEXT | Japan Society for the Promotion of Science (JSPS) 20K07351MEXT | Japan Society for the Promotion of Science (JSPS) 22H00443MEXT | Japan Society for the Promotion of Science (JSPS) 23H02671
6 · The paper itself

Abstract

Transcription factors BACH2 and IRF4 are both essential for antibody class-switch recombination (CSR) in activated B lymphocytes, while they oppositely regulate the differentiation of plasma cells (PCs). Here, we investigated how BACH2 and IRF4 interact during CSR and plasma-cell differentiation. We found that BACH2 organizes heterochromatin formation of target gene loci in mouse splenic B cells, including targets of IRF4 activation such as Aicda, an inducer of CSR, and Prdm1, a master plasma-cell regulator. Release of these gene loci from heterochromatin in response to B-cell receptor stimulation was coupled to AKT-mTOR pathway activation. In Bach2-deficient B cells, PC genes' activation depended on IRF4 protein accumulation, without an increase in Irf4 mRNA. Mechanistically, a PU.1-IRF4 heterodimer in activated B cells promoted BACH2 function by inducing gene expression of Bach2 and Pten, a negative regulator of AKT signaling. Elevated AKT activity in Bach2-deficient B cells resulted in IRF4 protein accumulation. Thus, BACH2 and IRF4 mutually modulate the activity of each other, and BACH2 inhibits PC differentiation by both the repression of PC genes and the restriction of IRF4 protein accumulation.

Indexed as

Basic-Leucine Zipper Transcription FactorsCell DifferentiationInterferon Regulatory FactorsPlasma CellsAnimalsB-LymphocytesHeterochromatinImmunoglobulin Class SwitchingInterferon Regulatory Factor-4MiceMice, Inbred C57BLMice, KnockoutProto-Oncogene ProteinsProto-Oncogene Proteins c-aktProto-Oncogene Protein Spi-1PTEN PhosphohydrolaseBach2 protein, mouseBasic-Leucine Zipper Transcription FactorsHeterochromatinInterferon Regulatory Factor-4Interferon Regulatory FactorsProto-Oncogene ProteinsProto-Oncogene Proteins c-aktProto-Oncogene Protein Spi-1PTEN PhosphohydrolasePten protein, mouseTOR Serine-Threonine KinasesTrans-ActivatorsBACH2 ComplexBach2-deficiencyHeterochromatinIRF4 Protein AccumulationThe PU.1-IRF4 Heterodimer

Identifiers

PMID38605225
PMCPMC11099079
OpenAlexW4394727005

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.