Evidence map›Paper›PMID 38605115›Full record

ArticleScientific reports2024

Interpretable detection of epiretinal membrane from optical coherence tomography with deep neural networks.

Murat Seçkin Ayhan, Jonas Neubauer, Mehmet Murat Uzel, Faik Gelisken, Philipp Berens

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
4.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Murat Seçkin Ayhan *Institute for Ophthalmic Research, University of Tübingen, Elfriede Aulhorn Str. 7, 72076, Tübingen, Germany.ORCID 0000-0002-3184-2353
Jonas Neubauer *University Eye Clinic, University of Tübingen, Tübingen, Germany.ORCID 0000-0002-4120-534X
Mehmet Murat UzelUniversity Eye Clinic, University of Tübingen, Tübingen, Germany.
Faik GeliskenUniversity Eye Clinic, University of Tübingen, Tübingen, Germany. Faik.Gelisken@med.uni-tuebingen.de.
Philipp BerensInstitute for Ophthalmic Research, University of Tübingen, Elfriede Aulhorn Str. 7, 72076, Tübingen, Germany. philipp.berens@uni-tuebingen.de.ORCID 0000-0002-0199-4727
STZ eyetrial · DEBalıkesir University · TRBG Klinik Tübingen · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study aimed to automatically detect epiretinal membranes (ERM) in various OCT-scans of the central and paracentral macula region and classify them by size using deep-neural-networks (DNNs). To this end, 11,061 OCT-images were included and graded according to the presence of an ERM and its size (small 100-1000 µm, large > 1000 µm). The data set was divided into training, validation and test sets (75%, 10%, 15% of the data, respectively). An ensemble of DNNs was trained and saliency maps were generated using Guided-Backprob. OCT-scans were also transformed into a one-dimensional-value using t-SNE analysis. The DNNs' receiver-operating-characteristics on the test set showed a high performance for no-ERM, small-ERM and large-ERM cases (AUC: 0.99, 0.92, 0.99, respectively; 3-way accuracy: 89%), with small-ERMs being the most difficult ones to detect. t-SNE analysis sorted cases by size and, in particular, revealed increased classification uncertainty at the transitions between groups. Saliency maps reliably highlighted ERM, regardless of the presence of other OCT features (i.e. retinal-thickening, intraretinal pseudo-cysts, epiretinal-proliferation) and entities such as ERM-retinoschisis, macular-pseudohole and lamellar-macular-hole. This study showed therefore that DNNs can reliably detect and grade ERMs according to their size not only in the fovea but also in the paracentral region. This is also achieved in cases of hard-to-detect, small-ERMs. In addition, the generated saliency maps can be used to highlight small-ERMs that might otherwise be missed. The proposed model could be used for screening-programs or decision-support-systems in the future.

Indexed as

Epiretinal MembraneHumansNeural Networks, ComputerRetrospective StudiesTomography, Optical CoherenceVisual Acuity

Identifiers

PMID38605115
PMCPMC11009346
OpenAlexW4394715838

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.