Evidence map›Paper›PMID 38605111›Full record

ArticleNature methods2024

brainlife.io: a decentralized and open-source cloud platform to support neuroscience research.

Soichi Hayashi, Bradley A Caron, Anibal Sólon Heinsfeld, Sophia Vinci-Booher, Brent McPherson, Daniel N Bullock, Giulia Bertò, Guiomar Niso, Sandra Hanekamp, Daniel Levitas and 54 more

Erratum issuedAbstract read
In one paragraph

Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

64 authors.

Soichi Hayashi *Indiana University, Bloomington, IN, USA.
Bradley A Caron *Indiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0002-4486-1203
Anibal Sólon HeinsfeldThe University of Texas, Austin, TX, USA.
Sophia Vinci-BooherIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0002-3626-146X
Brent McPhersonIndiana University, Bloomington, IN, USA.
Daniel N BullockIndiana University, Bloomington, IN, USA.
Giulia BertòThe University of Texas, Austin, TX, USA.
Guiomar NisoIndiana University, Bloomington, IN, USA.
Sandra HanekampThe University of Texas, Austin, TX, USA.
Daniel LevitasIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0003-2279-7447
Kimberly RayThe University of Texas, Austin, TX, USA.
Anne MacKenzieThe University of Texas, Austin, TX, USA.
Paolo AvesaniFondazione Bruno Kessler, Trento, Italy.ORCID http://orcid.org/0000-0001-8943-8911
Lindsey KitchellIndiana University, Bloomington, IN, USA.
Josiah K LeongIndiana University, Bloomington, IN, USA.
Filipi Nascimento-SilvaIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0002-9151-6517
Serge KoudoroIndiana University, Bloomington, IN, USA.
Hanna WillisUniversity of Oxford, Headington, Oxford, UK.ORCID http://orcid.org/0000-0002-5479-6169
Jasleen K JollyAnglia Ruskin University, Cambridge, UK.ORCID http://orcid.org/0000-0001-9878-4621
Derek PisnerThe University of Texas, Austin, TX, USA.
Taylor R ZuidemaIndiana University, Bloomington, IN, USA.
Jan W KurzawskiNew York University, New York, NY, USA.
Kyriaki MikellidouUniversity of Limassol, Nicosia, Cyprus.ORCID http://orcid.org/0000-0003-1860-6951
Aurore BussalbInstitut du Cerveau, CNRS, Sorbonne Université, Paris, France.
Maximilien ChaumonInstitut du Cerveau, CNRS, Sorbonne Université, Paris, France.
Nathalie GeorgeInstitut du Cerveau, CNRS, Sorbonne Université, Paris, France.ORCID http://orcid.org/0000-0002-1556-973X
Christopher RordenUniversity of South Carolina, Columbia, SC, USA.
Conner VictoryLawrence Technological University, Southfield, MI, USA.
Dheeraj BhatiaThe University of Texas, Austin, TX, USA.
Dogu Baran AydoganUniversity of Eastern Finland, Kuopio, Finland.
Fang-Cheng F YehUniversity of Pittsburgh, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-7946-2173
Franco DeloguLawrence Technological University, Southfield, MI, USA.ORCID http://orcid.org/0000-0002-6057-8723
Javier GuajeIndiana University, Bloomington, IN, USA.
Jelle VeraartNew York University, New York, NY, USA.
Jeremy FischerIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0001-7078-6609
Joshua FaskowitzIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0003-1814-7206
Ricardo FabregaIndiana University, Bloomington, IN, USA.
David HuntIndiana University, Bloomington, IN, USA.
Shawn McKeeUniversity of Michigan, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-4551-4502
Shawn T BrownHewlett-Packard Enterprise, Pittsburgh, PA, USA.
Stephanie HeymanSHEGEL, Massul, Luxembourg.
Vittorio IacovellaUniversity of Trento, Rovereto, Italy.
Amanda F MejiaIndiana University, Bloomington, IN, USA.
Daniele MarinazzoUniversity of Ghent, Ghent, Belgium.ORCID http://orcid.org/0000-0002-9803-0122
R Cameron CraddockThe University of Texas, Austin, TX, USA.
Emanuale OlivettiUniversity of Trento, Rovereto, Italy.
Jamie L HansonUniversity of Pittsburgh, Pittsburgh, PA, USA.ORCID http://orcid.org/0000-0002-0469-8886
Eleftherios GaryfallidisIndiana University, Bloomington, IN, USA.
Dan StanzioneThe University of Texas, Austin, TX, USA.
James CarsonThe University of Texas, Austin, TX, USA.
Robert HenschelIndiana University, Bloomington, IN, USA.
David Y HancockIndiana University, Bloomington, IN, USA.ORCID http://orcid.org/0000-0001-8082-8980
Craig A StewartIndiana University, Bloomington, IN, USA.
David SchnyerThe University of Texas, Austin, TX, USA.
Damian O EkeUniversity of Nottingham, Nottingham, UK.ORCID http://orcid.org/0000-0002-6210-1283
Russell A PoldrackStanford University, Stanford, CA, USA.
Steffen BollmannUniversity of Queensland, St Lucia, Queensland, Australia.ORCID http://orcid.org/0000-0002-2909-0906
Ashley StewartUniversity of Queensland, St Lucia, Queensland, Australia.ORCID http://orcid.org/0000-0002-5951-5952
Holly BridgeUniversity of Oxford, Headington, Oxford, UK.ORCID http://orcid.org/0000-0002-8089-6198
Ilaria SaniThe Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-4389-7263
Winrich A FreiwaldThe Rockefeller University, New York, NY, USA.
Aina PuceIndiana University, Bloomington, IN, USA.
Nicholas L PortIndiana University, Bloomington, IN, USA.
Franco PestilliIndiana University, Bloomington, IN, USA. pestilli@utexas.edu.ORCID http://orcid.org/0000-0002-2469-0494

Funding

ABCD-USA Consortium: Coordinating CenterU24DA041147 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SANDRA A BROWN, TERRY L. JERNIGAN · 2015 to 2026
$54.7M
ABCD-USA Consortium: Data Analysis, Informatics and Resource CenterU24DA041123 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ANDERS M DALE · 2015 to 2026
$51.5M
Mapping the Human Connectome: Structure, Function, and HeritabilityU54MH091657 · NIMH · WASHINGTON UNIVERSITY · PI UGURBIL, KAMIL, VAN ESSEN, DAVID C · 2010 to 2014
$34.7M
Adolescent Substance Use Initiation: Disentangling neurocognitive risks from consequences using longitudinal and genetically-informed methodsU01DA041120 · NIDA · UNIVERSITY OF MINNESOTA · PI Monica Luciana, Sylia Wilson · 2015 to 2026
$34.5M
ABCD-USA Consortium: Research ProjectU01DA041089 · NIDA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Joanna Jacobus, Susan F. Tapert · 2015 to 2026
$31.7M
Prospective Research Studies of Maturation (PRISM)- Research ProjectU01DA041134 · NIDA · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI ERIN MCGLADE, PERRY FRANKLIN RENSHAW · 2015 to 2026
$29.2M
ABCD-USA CONSORTIUM: RESEARCH PROJECTU01DA041048 · NIDA · CHILDREN'S HOSPITAL OF LOS ANGELES · PI Megan Marie Herting, ELIZABETH R SOWELL · 2015 to 2026
$28.7M
ABCD-USA Consortium: Research ProjectU01DA041106 · NIDA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Mary M Heitzeg, Chandra Sekhar Sripada · 2015 to 2026
$24.9M
FIU-ABCD: Pathways and Mechanisms to Addiction in the Latino Youth of South FloridaU01DA041156 · NIDA · FLORIDA INTERNATIONAL UNIVERSITY · PI Raul Gonzalez, Angela R Laird · 2015 to 2026
$22.8M
ABCD-USA Consortium: Research ProjectU01DA041148 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Damien A Fair, Rebekah S Huber · 2015 to 2026
$22.3M
ABCD-USA: NYC Research ProjectU01DA041174 · NIDA · YALE UNIVERSITY · PI Arielle Ryan Baskin-Sommers, Betty J Casey · 2015 to 2026
$19.7M
Adolescent Brain Cognitive Development (ABCD) Prospective Research in Studies of Maturation (PRISM) ConsortiumU01DA041117 · NIDA · UNIVERSITY OF MARYLAND BALTIMORE · PI LINDA CHANG, THOMAS M ERNST · 2015 to 2026
$19.5M
National Science Foundation (NSF) 1445604National Science Foundation (NSF) 1541335National Science Foundation (NSF) 1636893National Science Foundation (NSF) 1734853National Science Foundation (NSF) 1912270National Science Foundation (NSF) 1916518National Science Foundation (NSF) 2004877National Science Foundation (NSF) 2005506National Science Foundation (NSF) 2232628NIBIB NIH HHS P41 EB017183NIBIB NIH HHS R01 EB027585NIBIB NIH HHS R01 EB029272NIBIB NIH HHS R01 EB030896NIDA NIH HHS U01 DA041022NIDA NIH HHS U01 DA041025NIDA NIH HHS U01 DA041028NIDA NIH HHS U01 DA041048NIDA NIH HHS U01 DA041089NIDA NIH HHS U01 DA041093NIDA NIH HHS U01 DA041106NIDA NIH HHS U01 DA041117NIDA NIH HHS U01 DA041120NIDA NIH HHS U01 DA041134NIDA NIH HHS U01 DA041148NIDA NIH HHS U01 DA041156NIDA NIH HHS U01 DA041174NIDA NIH HHS U01 DA050987NIDA NIH HHS U01 DA050988NIDA NIH HHS U01 DA050989NIDA NIH HHS U01 DA051016NIDA NIH HHS U01 DA051018NIDA NIH HHS U01 DA051037NIDA NIH HHS U01 DA051038NIDA NIH HHS U01 DA051039NIDA NIH HHS U24 DA041123NIDA NIH HHS U24 DA041147NIMH NIH HHS R01 MH126699NIMH NIH HHS RF1 MH133701NIMH NIH HHS U54 MH091657NINDS NIH HHS UM1 NS132207U.S. Department of Health & Human Services | National Institutes of Health (NIH) RF1MH13370Wellcome TrustWellcome Trust (Wellcome) 226486/Z/22/Z
6 · The paper itself

Abstract

Neuroscience is advancing standardization and tool development to support rigor and transparency. Consequently, data pipeline complexity has increased, hindering FAIR (findable, accessible, interoperable and reusable) access. brainlife.io was developed to democratize neuroimaging research. The platform provides data standardization, management, visualization and processing and automatically tracks the provenance history of thousands of data objects. Here, brainlife.io is described and evaluated for validity, reliability, reproducibility, replicability and scientific utility using four data modalities and 3,200 participants.

Indexed as

Cloud ComputingNeurosciencesBrainHumansNeuroimagingReproducibility of ResultsSoftware

Identifiers

PMID38605111
PMCPMC11093740

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.