Evidence map›Paper›PMID 38605088›Full record

ArticleScientific data2024

OCTDL: Optical Coherence Tomography Dataset for Image-Based Deep Learning Methods.

Mikhail Kulyabin, Aleksei Zhdanov, Anastasia Nikiforova, Andrey Stepichev, Anna Kuznetsova, Mikhail Ronkin, Vasilii Borisov, Alexander Bogachev, Sergey Korotkich, Paul A Constable and 1 more

Abstract readDataset
In one paragraph

Article in Scientific data, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mikhail KulyabinPattern Recognition Lab, Department of Computer Science, Friedrich-Alexander-Universität Erlangen-Nürnberg, Martensstr. 3, 91058, Erlangen, Germany. mikhail.kulyabin@fau.de.ORCID 0009-0007-0440-030X
Aleksei ZhdanovEngineering School of Information Technologies, Telecommunications and Control Systems, Ural Federal University Named after the First President of Russia B. N. Yeltsin, Mira, 32, Yekaterinburg, 620078, Russia.ORCID 0000-0003-4725-3681
Anastasia NikiforovaOphthalmosurgery Clinic "Professorskaya Plus", Vostochnaya, 30, Yekaterinburg, 620075, Russia.ORCID 0000-0001-6672-6726
Andrey StepichevOphthalmosurgery Clinic "Professorskaya Plus", Vostochnaya, 30, Yekaterinburg, 620075, Russia.ORCID 0009-0005-4087-5957
Anna KuznetsovaOphthalmosurgery Clinic "Professorskaya Plus", Vostochnaya, 30, Yekaterinburg, 620075, Russia.ORCID 0009-0005-6983-0066
Mikhail RonkinEngineering School of Information Technologies, Telecommunications and Control Systems, Ural Federal University Named after the First President of Russia B. N. Yeltsin, Mira, 32, Yekaterinburg, 620078, Russia.ORCID 0000-0001-5522-988X
Vasilii BorisovEngineering School of Information Technologies, Telecommunications and Control Systems, Ural Federal University Named after the First President of Russia B. N. Yeltsin, Mira, 32, Yekaterinburg, 620078, Russia.ORCID 0000-0003-0486-7552
Alexander BogachevOphthalmosurgery Clinic "Professorskaya Plus", Vostochnaya, 30, Yekaterinburg, 620075, Russia.
Sergey KorotkichOphthalmosurgery Clinic "Professorskaya Plus", Vostochnaya, 30, Yekaterinburg, 620075, Russia.
Paul A ConstableFlinders University, College of Nursing and Health Sciences, Caring Futures Institute, Adelaide, SA 5042, Australia.ORCID 0000-0002-3994-1700
Andreas MaierPattern Recognition Lab, Department of Computer Science, Friedrich-Alexander-Universität Erlangen-Nürnberg, Martensstr. 3, 91058, Erlangen, Germany.ORCID 0000-0002-9550-5284

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Optical coherence tomography (OCT) is a non-invasive imaging technique with extensive clinical applications in ophthalmology. OCT enables the visualization of the retinal layers, playing a vital role in the early detection and monitoring of retinal diseases. OCT uses the principle of light wave interference to create detailed images of the retinal microstructures, making it a valuable tool for diagnosing ocular conditions. This work presents an open-access OCT dataset (OCTDL) comprising over 2000 OCT images labeled according to disease group and retinal pathology. The dataset consists of OCT records of patients with Age-related Macular Degeneration (AMD), Diabetic Macular Edema (DME), Epiretinal Membrane (ERM), Retinal Artery Occlusion (RAO), Retinal Vein Occlusion (RVO), and Vitreomacular Interface Disease (VID). The images were acquired with an Optovue Avanti RTVue XR using raster scanning protocols with dynamic scan length and image resolution. Each retinal b-scan was acquired by centering on the fovea and interpreted and cataloged by an experienced retinal specialist. In this work, we applied Deep Learning classification techniques to this new open-access dataset.

Indexed as

Deep LearningRetinaRetinal DiseasesTomography, Optical CoherenceDiabetic RetinopathyHumansMacular Edema

Identifiers

PMID38605088
PMCPMC11009408

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.