Evidence map›Paper›PMID 38601784›Full record

ArticleACS catalysis2024

Identification of the Thermal Activation Network in Human 15-Lipoxygenase-2: Divergence from Plant Orthologs and Its Relationship to Hydrogen Tunneling Activation Barriers.

Amanda Ohler, Paris E Taylor, Jasmine A Bledsoe, Anthony T Iavarone, Nathaniel C Gilbert, Adam R Offenbacher

Open access · greenAbstract read
In one paragraph

Article in ACS catalysis, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. A Foundational Shift in Models for Enzyme Function.Journal of the American Chemical Society · 2025
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Amanda OhlerDepartment of Chemistry, East Carolina University, Greenville, North Carolina 27858, United States.
Paris E TaylorDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, United States.
Jasmine A BledsoeDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, United States.
Anthony T IavaroneQB3/Chemistry Mass Spectrometry Facility, University of California, Berkeley, Berkeley, California 94720, United States.
Nathaniel C GilbertDepartment of Biological Sciences, Louisiana State University, Baton Rouge, Louisiana 70803, United States.ORCID https://orcid.org/0000-0002-6706-811X
Adam R OffenbacherDepartment of Chemistry, East Carolina University, Greenville, North Carolina 27858, United States.ORCID https://orcid.org/0000-0001-6990-7178
Louisiana State University · USEast Carolina University · USUniversity of California, Berkeley · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
High Definition Ion Mobility SpectrometerS10OD020062 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILLIAMS, EVAN R · 2015 to 2015
$590k
Conformational Flexibility of Lipoxygenases and its Role in Regulation and Substrate Acquisition.R15GM143724 · NIGMS · LOUISIANA STATE UNIV A&M COL BATON ROUGE · PI GILBERT, NATHANIEL · 2021 to 2021
$444k
NIGMS NIH HHS P30 GM124165NIGMS NIH HHS R15 GM143724NIH HHS S10 OD020062NIH HHS S10 OD021527Wellcome Trust
6 · The paper itself

Abstract

The oxidation of polyunsaturated fatty acids by lipoxygenases (LOXs) is initiated by a C-H cleavage step in which the hydrogen atom is transferred quantum mechanically (i.e., via tunneling). In these reactions, protein thermal motions facilitate the conversion of ground-state enzyme-substrate complexes to tunneling-ready configurations and are thus important for transferring energy from the solvent to the active site for the activation of catalysis. In this report, we employed temperature-dependent hydrogen-deuterium exchange mass spectrometry (TDHDX-MS) to identify catalytically linked, thermally activated peptides in a representative animal LOX, human epithelial 15-LOX-2. TDHDX-MS of wild-type 15-LOX-2 was compared to two active site mutations that retain structural stability but have increased activation energies (

Identifiers

PMID38601784
PMCPMC11003420
OpenAlexW4393262678

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.