Evidence map›Paper›PMID 38601671›Full record

ArticleHeliyon2024

Preserving multi-dimensional information: A hypersphere method for parameter space analysis.

Nicolas A C Davey, J Geoffrey Chase, Cong Zhou, Liam Murphy

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nicolas A C DaveyUniversity of Canterbury, New Zealand.
J Geoffrey ChaseUniversity of Canterbury, New Zealand.
Cong ZhouUniversity of Canterbury, New Zealand.
Liam MurphyUniversity of Canterbury, New Zealand.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Physiological modelling often involves models described by large numbers of variables and significant volumes of clinical data. Mathematical interpretation of such models frequently necessitates analysing data points in high-dimensional spaces. Existing algorithms for analysing high-dimensional points either lose important dimensionality or do not describe the full position of points. Hence, there is a need for an algorithm which preserves this information. Methods: The most-distant uncovered point (MDUP) hypersphere method is a binary classification approach which defines a collection of equidistant N-dimensional points as the union of hyperspheres. The method iteratively generates hyperspheres at the most distant point in the interest region not yet contained within any hypersphere, until the entire region of interest is defined by the union of all generated hyperspheres. This method is tested on a 7-dimensional space with up to 35.8 million points representing feasible and infeasible spaces of model parameters for a clinically validated cardiovascular system model. Results: For different numbers of input points, the MDUP hypersphere method tends to generate large spheres away from the boundary of feasible and infeasible points, but generates the greatest number of relatively much smaller spheres around the boundary of the region of interest to fill this space. Runtime scales quadratically, in part because the current MDUP implementation is not parallelised. Conclusions: The MDUP hypersphere method can define points in a space of any dimension using only a collection of centre points and associated radii, making the results easily interpretable. It can identify large continuous regions, and in many cases capture the general structure of a region in only a relative few hyperspheres. The MDUP method also shows promise for initialising optimisation algorithm starting conditions within pre-defined feasible regions of model parameter spaces, which could improve model identifiability and the quality of optimisation results.

Indexed as

CardiovascularDimensionalityHypersphereParameter space analysisVisualisation

Identifiers

PMID38601671
PMCPMC11004565

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.