Evidence map›Paper›PMID 38600542›Full record

ArticleAnnals of clinical microbiology and antimicrobials2024

Clinical manifestations, antimicrobial resistance and genomic feature analysis of multidrug-resistant Elizabethkingia strains.

Chongyang Wu, Li Xiong, Quanfeng Liao, Weili Zhang, Yuling Xiao, Yi Xie

Open access · goldAbstract read
In one paragraph

Article in Annals of clinical microbiology and antimicrobials, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
13.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Comprehensive Phenotypic Characterization of ClinicalInternational journal of molecular sciences · 2026
    Article
  6. Article
  7. Pathogens (Basel, Switzerland) · 2026
    Review
  8. Article
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  11. Article
  12. Review
  13. Cefiderocol-ResistantCase reports in infectious diseases · 2025
    Article
  14. Article
  15. Genomic profiling ofFrontiers in microbiology · 2025
    Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chongyang WuDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China.
Li XiongDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China.
Quanfeng LiaoDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China.
Weili ZhangDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China.
Yuling XiaoDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China.
Yi XieDepartment of Laboratory Medicine, West China Hospital of Sichuan University, Chengdu, Sichuan, 610041, China. xieyi@scu.edu.cn.
West China Hospital of Sichuan University · CNSichuan University · CN

Funding

Special Foundation for National Science and Technology Basic Research Program of China 2019FY101200
6 · The paper itself

Abstract

backgroundElizabethkingia is emerging as an opportunistic pathogen in humans. The aim of this study was to investigate the clinical epidemiology, antimicrobial susceptibility, virulence factors, and genome features of Elizabethkingia spp.

methodsClinical data from 71 patients who were diagnosed with Elizabethkingia-induced pneumonia and bacteremia between August 2019 and September 2021 were analyzed. Whole-genome sequencing was performed on seven isolates, and the results were compared with a dataset of 83 available Elizabethkingia genomes. Genomic features, Kyoto Encyclopedia of Genes and Genomes (KEGG) results and clusters of orthologous groups (COGs) were analyzed.

resultsThe mean age of the patients was 56.9 ± 20.7 years, and the in-hospital mortality rate was 29.6% (21/71). Elizabethkingia strains were obtained mainly from intensive care units (36.6%, 26/71) and emergency departments (32.4%, 23/71). The majority of the strains were isolated from respiratory tract specimens (85.9%, 61/71). All patients had a history of broad-spectrum antimicrobial exposure. Hospitalization for invasive mechanical ventilation or catheter insertion was found to be a risk factor for infection. The isolates displayed a high rate of resistance to cephalosporins and carbapenems, but all were susceptible to minocycline and colistin. Genomic analysis identified five β-lactamase genes (bla

conclusionThe Elizabethkingia genus exhibits multidrug resistance and carries carbapenemase genes. This study presents a comparative genomic analysis of Elizabethkingia, providing knowledge that facilitates a better understanding of this microorganism.

Indexed as

Anti-Bacterial AgentsFlavobacteriaceae InfectionsAdultAgedbeta-LactamasesDrug Resistance, BacterialGenome, BacterialGenomicsHumansMicrobial Sensitivity TestsMiddle AgedAnti-Bacterial Agentsbeta-LactamasesAntimicrobial susceptibilityCarbapenem resistanceElizabethkingiaGenomic analysis

Identifiers

PMID38600542
PMCPMC11007976
OpenAlexW4394689809

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.