Evidence map›Paper›PMID 38598723›Full record

ArticleACS chemical biology2024

Virtual Screening of a Chemically Diverse "Superscaffold" Library Enables Ligand Discovery for a Key GPCR Target.

Katharina Grotsch, Anastasiia V Sadybekov, Sydney Hiller, Saheem Zaidi, Dmitry Eremin, Austen Le, Yongfeng Liu, Evan Carlton Smith, Christos Illiopoulis-Tsoutsouvas, Joice Thomas and 8 more

Abstract read
In one paragraph

Article in ACS chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Katharina GrotschDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.
Anastasiia V SadybekovDepartment of Quantitative and Computational Biology, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0003-3925-983X
Sydney HillerDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.
Saheem ZaidiDepartment of Quantitative and Computational Biology, University of Southern California, Los Angeles 90089, California, United States.
Dmitry EreminDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0003-2946-5293
Austen LeDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.
Yongfeng LiuDepartment of Pharmacology, School of Medicine, University of North Carolina, Chapel Hill 27599, North Carolina, United States.ORCID 0000-0002-8649-7892
Evan Carlton SmithDepartment of Pharmaceutical Sciences, Center for Drug Discovery, Boston 02115, Massachusetts, United States.
Christos Illiopoulis-TsoutsouvasDepartment of Pharmaceutical Sciences, Center for Drug Discovery, Boston 02115, Massachusetts, United States.ORCID 0000-0003-3750-431X
Joice ThomasDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0001-5517-4663
Shubhangi AggarwalDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0001-7115-2931
Julie E PickettDepartment of Pharmacology, School of Medicine, University of North Carolina, Chapel Hill 27599, North Carolina, United States.ORCID 0000-0002-9535-8528
Cesar ReyesLoker Hydrocarbon Research Institute, University of Southern California, Los Angeles 90089, California, United States.
Elias PicazoLoker Hydrocarbon Research Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0001-5153-4131
Bryan L RothDepartment of Pharmacology, School of Medicine, University of North Carolina, Chapel Hill 27599, North Carolina, United States.ORCID 0000-0002-0561-6520
Alexandros MakriyannisDepartment of Pharmaceutical Sciences, Center for Drug Discovery, Boston 02115, Massachusetts, United States.ORCID 0000-0003-3272-3687
Vsevolod KatritchDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0003-3883-4505
Valery V FokinDepartment of Chemistry, the Bridge Institute, University of Southern California, Los Angeles 90089, California, United States.ORCID 0000-0001-7323-2177

Funding

Project 3 - In vivo pharmacology of cannabinoid receptor probesP01DA009158 · NIDA · UNIVERSITY OF CONNECTICUT STORRS · PI Alexandros Makriyannis · 1994 to 2026
$26.0M
Illuminating the Druggable GPCR-omeU24DK116195 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROTH, BRYAN L., SHOICHET, BRIAN K · 2017 to 2022
$14.3M
Molecular Details of Psychoactive Drug ActionsR01MH112205 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Bryan L. Roth, Brian K Shoichet · 2017 to 2026
$6.1M
Structure and Function of CB2 ReceptorR01DA045020 · NIDA · NORTHEASTERN UNIVERSITY · PI BOHN, LAURA M., KATRITCH, VSEVOLOD · 2017 to 2021
$3.9M
Structure Function of CB1 Cannabinoid ReceptorR01DA041435 · NIDA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KATRITCH, VSEVOLOD, MAKRIYANNIS, ALEXANDROS · 2016 to 2020
$3.6M
Training Program on Development of Medications for Substance Use DisorderT32DA055553 · NIDA · NORTHEASTERN UNIVERSITY · PI Raymond G. Booth, Alexandros Makriyannis · 2022 to 2026
$1.3M
Efficient synthon-based modular screening of Giga-to-Terra-scale virtual librariesR01GM147537 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KATRITCH, VSEVOLOD · 2022 to 2024
$1.2M
Synthesis and Characterization of Nitrogen and Sulfur Donor-Acceptor Stenhouse AdductsR00GM140070 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI PICAZO, ELIAS · 2022 to 2024
$932k
Computational approaches to discover ligands with new chemotypes and functional propertiesR35GM153437 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI VSEVOLOD KATRITCH · 2024 to 2026
$899k
NIDA NIH HHS P01 DA009158NIDA NIH HHS R01 DA041435NIDA NIH HHS R01 DA045020NIDA NIH HHS T32 DA055553NIDDK NIH HHS U24 DK116195NIGMS NIH HHS R00 GM140070NIGMS NIH HHS R01 GM147537NIGMS NIH HHS R35 GM153437NIMH NIH HHS R01 MH112205
6 · The paper itself

Abstract

The advent of ultra-large libraries of drug-like compounds has significantly broadened the possibilities in structure-based virtual screening, accelerating the discovery and optimization of high-quality lead chemotypes for diverse clinical targets. Compared to traditional high-throughput screening, which is constrained to libraries of approximately one million compounds, the ultra-large virtual screening approach offers substantial advantages in both cost and time efficiency. By expanding the chemical space with compounds synthesized from easily accessible and reproducible reactions and utilizing a large, diverse set of building blocks, we can enhance both the diversity and quality of the discovered lead chemotypes. In this study, we explore new chemical spaces using reactions of sulfur(VI) fluorides to create a combinatorial library consisting of several hundred million compounds. We screened this virtual library for cannabinoid type II receptor (CB

Indexed as

High-Throughput Screening AssaysReceptor, Cannabinoid, CB2Small Molecule LibrariesDrug DiscoveryLigandsReceptors, G-Protein-CoupledLigandsReceptor, Cannabinoid, CB2Receptors, G-Protein-CoupledSmall Molecule Libraries

Identifiers

PMID38598723
PMCPMC12034570

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.