Evidence map›Paper›PMID 38596431›Full record

ArticleNAR cancer2024

TDP2 is a regulator of estrogen-responsive oncogene expression.

Nicholas Manguso, Minhyung Kim, Neeraj Joshi, Md Rasel Al Mahmud, Juan Aldaco, Ryusuke Suzuki, Felipe Cortes-Ledesma, Xiaojiang Cui, Shintaro Yamada, Shunichi Takeda and 3 more

Open access · goldAbstract read
In one paragraph

Article in NAR cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Validation of Prognostic Circulating Cell-Free RNA BiomarkersCurrent issues in molecular biology · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 3 countries.

Nicholas MangusoDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Minhyung KimDepartment of Urology and Computational Biomedicine, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Neeraj JoshiDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Md Rasel Al MahmudDepartment of Radiation Genetics, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.
Juan AldacoDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Ryusuke SuzukiDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Felipe Cortes-LedesmaCentro Andaluz de Biología Molecular y Medicina Regenerativa (CABIMER), CSIC-Universidad de Sevilla-Universidad Pablo de Olavide, Sevilla, 41092, Spain.ORCID https://orcid.org/0000-0002-0440-6783
Xiaojiang CuiDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Shintaro YamadaDepartment of Radiation Genetics, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.
Shunichi TakedaDepartment of Radiation Genetics, Graduate School of Medicine, Kyoto University, Kyoto 606-8501, Japan.ORCID https://orcid.org/0000-0002-7924-7991
Armando GiulianoDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.
Sungyong YouDepartment of Urology and Computational Biomedicine, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.ORCID https://orcid.org/0000-0003-3513-1783
Hisashi TanakaDepartment of Surgery, Cedars-Sinai Medical Center, West Hollywood, CA 90048 USA.ORCID https://orcid.org/0000-0001-9223-4186
Cedars-Sinai Medical Center · USKyoto University · JPCentro Andaluz de Biología Molecular y Medicina Regenerativa · ES

Funding

The Role of FOXCI in Basal-like Breast CancerR01CA151610 · NCI · SAINT JOHN'S CANCER INSTITUTE · PI CUI, XIAOJIANG · 2011 to 2022
$3.8M
Mechanisms of gene amplification in human cancersR01CA149385 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI TANAKA, HISASHI · 2010 to 2022
$3.4M
Replacement of Fluorescence Imaging SystemR01GM141698 · NIGMS · CLEVELAND STATE UNIVERSITY · PI BOERNER, VALENTIN · 2022 to 2025
$2.0M
Crosslinking-based targeted therapy for triple-negative breast cancerR21CA280458 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI CHEN, SHENGXI, CUI, XIAOJIANG · 2023 to 2024
$418k
NCI NIH HHS R01 CA149385NCI NIH HHS R01 CA151610NCI NIH HHS R21 CA280458NIGMS NIH HHS R01 GM141698
6 · The paper itself

Abstract

With its ligand estrogen, the estrogen receptor (ER) initiates a global transcriptional program, promoting cell growth. This process involves topoisomerase 2 (TOP2), a key protein in resolving topological issues during transcription by cleaving a DNA duplex, passing another duplex through the break, and repairing the break. Recent studies revealed the involvement of various DNA repair proteins in the repair of TOP2-induced breaks, suggesting potential alternative repair pathways in cases where TOP2 is halted after cleavage. However, the contribution of these proteins in ER-induced transcriptional regulation remains unclear. We investigated the role of tyrosyl-DNA phosphodiesterase 2 (TDP2), an enzyme for the removal of halted TOP2 from the DNA ends, in the estrogen-induced transcriptome using both targeted and global transcription analyses.

Identifiers

PMID38596431
PMCPMC11000318
OpenAlexW4394578971

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.