Evidence map›Paper›PMID 38594438›Full record

ArticleScientific reports2024

Glycolysis is reduced in dengue virus 2 infected liver cells.

Chanida Chumchanchira, Suwipa Ramphan, Wannapa Sornjai, Sittiruk Roytrakul, Pathrapol Lithanatudom, Duncan R Smith

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Chanida ChumchanchiraPhD Degree Program in Biology (International Program), Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
Suwipa RamphanInstitute of Molecular Biosciences, Mahidol University, Nakhon Pathom, 73170, Thailand.
Wannapa SornjaiInstitute of Molecular Biosciences, Mahidol University, Nakhon Pathom, 73170, Thailand.
Sittiruk RoytrakulNational Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency, Khlong Luang, Pathum Thani, 12120, Thailand.
Pathrapol LithanatudomDepartment of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. pathrapol_li@hotmail.com.
Duncan R SmithInstitute of Molecular Biosciences, Mahidol University, Nakhon Pathom, 73170, Thailand. duncan_r_smith@hotmail.com.
Mahidol University · THChiang Mai University · THNational Center for Genetic Engineering and Biotechnology · TH

Funding

Mahidol University IRN58W0002Mahidol University Research assistantship 2020Thailand Research Fund IRN5802PHDW03 under IRN58W0002Thailand Research Fund IRN58W0002
6 · The paper itself

Abstract

Infections with dengue virus (DENV) remain a worldwide public health problem. A number of bona fide cellular targets of DENV have been identified including liver cells. Despite the many lines of evidence confirming the involvement of hepatocytes during DENV infection, only a few studies have used proteomic analysis to understand the modulation of the cellular proteome occurring upon DENV infection. We utilized a 2D-gel electrophoresis analysis to identify proteins that were differentially regulated by DENV 2 infection of liver (Hep3B) cells at 12 h post infection (hpi) and at 48 hpi. The analysis identifies 4 proteins differentially expressed at 12 hpi, and 14 differentially regulated at 48 hpi. One candidate protein identified as downregulated at 48 hpi in the proteomic analysis (GAPDH) was validated in western blotting in Hep3B cells, and subsequently in induced pluripotent stem cell (iPSC) derived human hepatocytes. The reduced expression of GAPDH was coupled with an increase in NADH, and a significantly reduced NAD + /NADH ratio, strongly suggesting that glycolysis is down regulated in response to DENV 2 infection. Metformin, a well characterized drug used in the treatment of diabetes mellitus, is an inhibitor of hepatic gluconeogenesis was shown to reduce the level of DENV 2 infection and new virus production. Collectively these results show that although glycolysis is reduced, glucose is still required, possibly for use by the pentose phosphate pathway to generate nucleosides required for viral replication.

Indexed as

DengueDengue VirusGlyceraldehyde-3-Phosphate DehydrogenasesGlycolysisHepatocytesHumansLiverNADProteomeProteomicsVirus ReplicationGlyceraldehyde-3-Phosphate DehydrogenasesNADProteome

Identifiers

PMID38594438
PMCPMC11004007
OpenAlexW4394593877

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.