Evidence map›Paper›PMID 38594251›Full record

ArticleNature communications2024

DHX9 maintains epithelial homeostasis by restraining R-loop-mediated genomic instability in intestinal stem cells.

Xingxing Ren, Qiuyuan Liu, Peirong Zhou, Tingyue Zhou, Decai Wang, Qiao Mei, Richard A Flavell, Zhanju Liu, Mingsong Li, Wen Pan and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 34 citations in OpenAlex.

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  16. cGAS-STING signaling in pollution-induced toxicity: mechanism and relieving medication.Apoptosis : an international journal on programmed cell death · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Xingxing RenHefei National Research Center for Physical Sciences at the Microscale, School of Basic Medical Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, 230001, Hefei, China.ORCID http://orcid.org/0000-0002-8601-5216
Qiuyuan LiuDepartment of Gastroenterology, The First Affiliated Hospital of Anhui Medical University, Hefei, 230022, China.
Peirong ZhouDepartment of Gastroenterology, Third Affiliated Hospital of Guangzhou Medical University, 510145, Guangzhou, China.
Tingyue ZhouKey Laboratory of immune response and immunotherapy, Center for Advanced Interdisciplinary Science and Biomedicine of IHM, School of Basic Medical Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China.
Decai WangKey Laboratory of immune response and immunotherapy, Center for Advanced Interdisciplinary Science and Biomedicine of IHM, School of Basic Medical Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China.
Qiao MeiDepartment of Gastroenterology, The First Affiliated Hospital of Anhui Medical University, Hefei, 230022, China.
Richard A FlavellDepartment of Immunobiology, Yale University School of Medicine, New Haven, Connecticut, USA.ORCID http://orcid.org/0000-0003-4461-0778
Zhanju LiuCenter for IBD Research, Department of Gastroenterology, Shanghai Tenth People's Hospital, Tongji University School of Medicine, Shanghai, 200072, China. zhanjuliu@tongji.edu.cn.ORCID http://orcid.org/0000-0002-0326-543X
Mingsong LiDepartment of Gastroenterology, Third Affiliated Hospital of Guangzhou Medical University, 510145, Guangzhou, China. lims661216@163.com.ORCID http://orcid.org/0000-0003-2115-5928
Wen PanHefei National Research Center for Physical Sciences at the Microscale, School of Basic Medical Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, 230001, Hefei, China. wenpan@ustc.edu.cn.ORCID http://orcid.org/0000-0002-8866-6354
Shu ZhuHefei National Research Center for Physical Sciences at the Microscale, School of Basic Medical Sciences, Division of Life Sciences and Medicine, University of Science and Technology of China, 230001, Hefei, China. zhushu@ustc.edu.cn.ORCID http://orcid.org/0000-0002-8163-0869
University of Science and Technology of China · CNAnhui Medical University · CNThird Affiliated Hospital of Guangzhou Medical University · CNHoward Hughes Medical Institute · USTongji University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 92374204
6 · The paper itself

Abstract

Epithelial barrier dysfunction and crypt destruction are hallmarks of inflammatory bowel disease (IBD). Intestinal stem cells (ISCs) residing in the crypts play a crucial role in the continuous self-renewal and rapid recovery of intestinal epithelial cells (IECs). However, how ISCs are dysregulated in IBD remains poorly understood. Here, we observe reduced DHX9 protein levels in IBD patients, and mice with conditional DHX9 depletion in the intestinal epithelium (Dhx9

Indexed as

Inflammatory Bowel DiseasesR-Loop StructuresAnimalsDEAD-box RNA HelicasesEpithelial CellsHomeostasisHumansIntestinal MucosaMiceNeoplasm ProteinsPaneth CellsStem CellsDEAD-box RNA HelicasesDHX9 protein, humanDhx9 protein, mouseNeoplasm Proteins

Identifiers

PMID38594251
PMCPMC11004185
OpenAlexW4394622592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.