Evidence map›Paper›PMID 38593079›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Episymbiotic Saccharibacteria TM7x modulates the susceptibility of its host bacteria to phage infection and promotes their coexistence.

Qiu Zhong, Binyou Liao, Jiazhen Liu, Wei Shen, Jing Wang, Leilei Wei, Yansong Ma, Pu-Ting Dong, Batbileg Bor, Jeffrey S McLean and 8 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
13.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 29 citations in OpenAlex.

  1. A host-encoded prophage targets a Candidate Phyla Radiation bacterium and shapes episymbiotic interactions.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Oral Actinobacteria sense and defend against parasitic epibionts.bioRxiv : the preprint server for biology · 2026
    Article
  3. Review
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  5. Article
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  7. Phase variation inEngineering microbiology · 2026
    Article
  8. Article
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  12. Why Do FilamentousAnnual review of microbiology · 2025
    Review
  13. Identifying essential genes inJournal of bacteriology · 2025
    Article
  14. Article
  15. Article
  16. Article
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  19. Article
  20. Beyond genomics in Patescibacteria: A trove of unexplored biology packed into ultrasmall bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 2 countries.

Qiu Zhong *Department of Microbiology, College of Basic Medical Sciences, Key Laboratory of Microbial Engineering Under the Educational Committee in Chongqing, Army Medical University, Chongqing 400038, China.
Binyou Liao *State Key Laboratory of Oral Diseases, National Center for Stomatology, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, Sichuan 610041, China.ORCID 0000-0002-2622-1632
Jiazhen Liu *Department of Microbiology, College of Basic Medical Sciences, Key Laboratory of Microbial Engineering Under the Educational Committee in Chongqing, Army Medical University, Chongqing 400038, China.
Wei ShenDepartment of Infectious Diseases, Institute for Viral Hepatitis, Key Laboratory of Molecular Biology for Infectious Diseases, Ministry of Education, the Second Affiliated Hospital of Chongqing Medical University, Chongqing 401336, China.
Jing WangDepartment of Microbiology, College of Basic Medical Sciences, Key Laboratory of Microbial Engineering Under the Educational Committee in Chongqing, Army Medical University, Chongqing 400038, China.
Leilei WeiDepartment of Laboratory Medicine, Daping Hospital, Army Medical University, Chongqing 400038, China.
Yansong MaDepartment of Orthodontics, Capital Medical University, Beijing 100050, China.
Pu-Ting DongDepartment of Microbiology, The American Dental Association Forsyth Institute, Cambridge, MA 02142.
Batbileg BorDepartment of Microbiology, The American Dental Association Forsyth Institute, Cambridge, MA 02142.
Jeffrey S McLeanDepartment of Periodontics, University of Washington, Seattle, WA 98119.ORCID 0000-0001-9934-5137
Yunjie ChangDepartment of Cell Biology, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China.
Wenyuan ShiDepartment of Microbiology, The American Dental Association Forsyth Institute, Cambridge, MA 02142.
Lujia CenDepartment of Microbiology, The American Dental Association Forsyth Institute, Cambridge, MA 02142.
Miaomiao WuState Key Laboratory of Oral Diseases, National Center for Stomatology, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, Sichuan 610041, China.
Jun LiuDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06536.ORCID 0000-0003-3108-6735
Yan LiState Key Laboratory of Oral Diseases, National Center for Stomatology, National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, Sichuan 610041, China.ORCID 0000-0002-2323-8105
Xuesong HeDepartment of Microbiology, The American Dental Association Forsyth Institute, Cambridge, MA 02142.ORCID 0000-0002-3333-9188
Shuai LeDepartment of Microbiology, College of Basic Medical Sciences, Key Laboratory of Microbial Engineering Under the Educational Committee in Chongqing, Army Medical University, Chongqing 400038, China.ORCID 0000-0003-3748-5454
Army Medical University · CNAmerican Dental Association · USSichuan University · CNUniversity of Washington · US

Funding

Structure-Function Relationships in the Spirochetal Flagellar MotorR01AI087946 · NIAID · YALE UNIVERSITY · PI LIU, JUN · 2010 to 2025
$6.6M
Domestication and characterization of TM7-the most elusive oral phylumR01DE023810 · NIDCR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Xuesong He, Jeffrey Scott McLean · 2014 to 2026
$6.6M
Delineation of unique flagellar proteins in spirochetesR01AI132818 · NIAID · EAST CAROLINA UNIVERSITY · PI Jun Liu, MD A MOTALEB · 2018 to 2026
$3.3M
Structural basis of phage infection and DNA ejectionR01GM110243 · NIGMS · YALE UNIVERSITY · PI LIU, JUN, MOLINEUX, IAN J · 2014 to 2024
$3.1M
Functional and Structural Analysis of the Dot/Icm Type IVB Secretion MachineR01AI152421 · NIAID · YALE UNIVERSITY · PI LIU, JUN, ROY, CRAIG R. · 2020 to 2024
$2.9M
Impact of Saccharibacteria and their bacterial hosts in Periodontal and Inflammatory DiseasesR01DE031274 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI Batbileg Bor · 2022 to 2026
$2.5M
Host tRNA-derived small RNAs (tsRNAs) mediate interactions between host and oral microbesR01DE030943 · NIDCR · ADA FORSYTH INSTITUTE, INC. · PI Xuesong He · 2022 to 2026
$2.4M
High-throughput electron cryo-microscopeS10OD023603 · OD · YALE UNIVERSITY · PI SIGWORTH, FREDERICK J · 2018 to 2018
$1.9M
Initiation of Phage InfectionR01GM124378 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI MOLINEUX, IAN J · 2017 to 2020
$1.3M
NIAID NIH HHS R01 AI087946NIAID NIH HHS R01 AI132818NIAID NIH HHS R01 AI152421NIDCR NIH HHS R01 DE023810NIDCR NIH HHS R01 DE030943NIDCR NIH HHS R01 DE031274NIGMS NIH HHS R01 GM110243NIGMS NIH HHS R01 GM124378NIH HHS S10 OD023603
6 · The paper itself

Abstract

Bacteriophages (phages) play critical roles in modulating microbial ecology. Within the human microbiome, the factors influencing the long-term coexistence of phages and bacteria remain poorly investigated. Saccharibacteria (formerly TM7) are ubiquitous members of the human oral microbiome. These ultrasmall bacteria form episymbiotic relationships with their host bacteria and impact their physiology. Here, we showed that during surface-associated growth, a human oral Saccharibacteria isolate (named TM7x) protects its host bacterium, a

Indexed as

BacteriophagesBacteriaHumansSymbiosisbacteria-phage interactionepisymbiosisphage resistanceSaccharibacteriaTM7x

Identifiers

PMID38593079
PMCPMC11032452
OpenAlexW4394597902

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.