Evidence map›Paper›PMID 38589723›Full record

ArticleMedical & biological engineering & computing2024

Lung pneumonia severity scoring in chest X-ray images using transformers.

Bouthaina Slika, Fadi Dornaika, Hamid Merdji, Karim Hammoudi

Abstract read
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Article in Medical & biological engineering & computing, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Bouthaina SlikaUniversity of the Basque Country UPV/EHU, San Sebastian, Spain.ORCID http://orcid.org/0009-0003-4939-2367
Fadi DornaikaUniversity of the Basque Country UPV/EHU, San Sebastian, Spain. fadi.dornaika@ehu.eus.ORCID http://orcid.org/0000-0001-6581-9680
Hamid MerdjiINSERM, UMR 1260, Regenerative Nanomedicine (RNM), CRBS, University of Strasbourg, Strasbourg, France.ORCID http://orcid.org/0000-0002-4670-1596
Karim HammoudiUniversité de Haute-Alsace IRIMAS, Mulhouse, France.ORCID http://orcid.org/0000-0002-4804-4796

Funding

Agencia Estatal de Investigación PID2021-126701OB-I00
6 · The paper itself

Abstract

To create robust and adaptable methods for lung pneumonia diagnosis and the assessment of its severity using chest X-rays (CXR), access to well-curated, extensive datasets is crucial. Many current severity quantification approaches require resource-intensive training for optimal results. Healthcare practitioners require efficient computational tools to swiftly identify COVID-19 cases and predict the severity of the condition. In this research, we introduce a novel image augmentation scheme as well as a neural network model founded on Vision Transformers (ViT) with a small number of trainable parameters for quantifying COVID-19 severity and other lung diseases. Our method, named Vision Transformer Regressor Infection Prediction (ViTReg-IP), leverages a ViT architecture and a regression head. To assess the model's adaptability, we evaluate its performance on diverse chest radiograph datasets from various open sources. We conduct a comparative analysis against several competing deep learning methods. Our results achieved a minimum Mean Absolute Error (MAE) of 0.569 and 0.512 and a maximum Pearson Correlation Coefficient (PC) of 0.923 and 0.855 for the geographic extent score and the lung opacity score, respectively, when the CXRs from the RALO dataset were used in training. The experimental results reveal that our model delivers exceptional performance in severity quantification while maintaining robust generalizability, all with relatively modest computational requirements. The source codes used in our work are publicly available at https://github.com/bouthainas/ViTReg-IP .

Indexed as

COVID-19LungPneumoniaSeverity of Illness IndexDeep LearningHumansNeural Networks, ComputerRadiography, ThoracicSARS-CoV-2Automatic predictionChest X-raySeverity quantificationVision transformer

Identifiers

PMID38589723
PMCPMC11289055

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.