Evidence map›Paper›PMID 38589469›Full record

ArticleNature microbiology2024

Reversible conjugation of a CBASS nucleotide cyclase regulates bacterial immune response to phage infection.

Larissa Krüger, Laura Gaskell-Mew, Shirley Graham, Sally Shirran, Robert Hertel, Malcolm F White

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

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  9. Diversity and abundance of ring nucleases in type III CRISPR-Cas loci.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Larissa KrügerSchool of Biology, University of St Andrews, St Andrews, UK. lmak1@st-andrews.ac.uk.ORCID http://orcid.org/0000-0003-2053-4010
Laura Gaskell-MewSchool of Biology, University of St Andrews, St Andrews, UK.
Shirley GrahamSchool of Biology, University of St Andrews, St Andrews, UK.
Sally ShirranSchool of Biology, University of St Andrews, St Andrews, UK.
Robert HertelGenomic and Applied Microbiology, Göttingen Centre for Molecular Biosciences, Georg-August-University Göttingen, Göttingen, Germany.ORCID http://orcid.org/0000-0003-4982-6084
Malcolm F WhiteSchool of Biology, University of St Andrews, St Andrews, UK. mfw2@st-andrews.ac.uk.ORCID http://orcid.org/0000-0003-1543-9342
University of St Andrews · GBUniversity of Göttingen · DE

Funding

EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101018608European Molecular Biology Organization (EMBO) ALTF234-2022RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/T00875x/1
6 · The paper itself

Abstract

Prokaryotic antiviral defence systems are frequently toxic for host cells and stringent regulation is required to ensure survival and fitness. These systems must be readily available in case of infection but tightly controlled to prevent activation of an unnecessary cellular response. Here we investigate how the bacterial cyclic oligonucleotide-based antiphage signalling system (CBASS) uses its intrinsic protein modification system to regulate the nucleotide cyclase. By integrating a type II CBASS system from Bacillus cereus into the model organism Bacillus subtilis, we show that the protein-conjugating Cap2 (CBASS associated protein 2) enzyme links the cyclase exclusively to the conserved phage shock protein A (PspA) in the absence of phage. The cyclase-PspA conjugation is reversed by the deconjugating isopeptidase Cap3 (CBASS associated protein 3). We propose a model in which the cyclase is held in an inactive state by conjugation to PspA in the absence of phage, with conjugation released upon infection, priming the cyclase for activation.

Indexed as

Bacillus subtilisBacterial ProteinsBacillus cereusBacteriophagesGene Expression Regulation, BacterialPhosphorus-Oxygen LyasesSignal TransductionBacterial ProteinsPhosphorus-Oxygen Lyases

Identifiers

PMID38589469
PMCPMC11153139
OpenAlexW4394577347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.