Evidence map›Paper›PMID 38588312›Full record

ArticleMicrobial biotechnology2024

Characterization of an extremophile bacterial acid phosphatase derived from metagenomics analysis.

Maria-Isabel Recio, Jesús de la Torre, Abdelali Daddaoua, Zulema Udaondo, Estrella Duque, José Antonio Gavira, Carmen López-Sánchez, Juan L Ramos

Abstract read
In one paragraph

Article in Microbial biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
  5. Thermotolerant class A acid phosphatase active across broad pH range and diverse substrates.Protein science : a publication of the Protein Society · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maria-Isabel RecioConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Department of Environmental Protection, Granada, Spain.
Jesús de la TorreConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Department of Environmental Protection, Granada, Spain.
Abdelali DaddaouaDepartment of Biochemistry and Molecular Biology II, Pharmacy School, Granada University, Granada, Spain.ORCID 0000-0002-7348-6393
Zulema UdaondoDepartment of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.ORCID 0000-0003-3445-6842
Estrella DuqueConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Department of Environmental Protection, Granada, Spain.
José Antonio GaviraConsejo Superior de Investigaciones Científicas, Instituto de Ciencias de la Tierra, Granada, Spain.
Carmen López-SánchezConsejo Superior de Investigaciones Científicas, Instituto de Ciencias de la Tierra, Granada, Spain.
Juan L RamosConsejo Superior de Investigaciones Científicas, Estación Experimental del Zaidín, Department of Environmental Protection, Granada, Spain.ORCID 0000-0002-8731-7435

Funding

Ministerio de Ciencia e Innovación EJPSOIL862695Ministerio de Ciencia e Innovación PID2021123469OBI00Ministerio de Ciencia e Innovación PREPSOIL (HE/CL5SOILM/0102)Ministerio de Ciencia e Innovación TED2021129632BI00
6 · The paper itself

Abstract

Acid phosphatases are enzymes that play a crucial role in the hydrolysis of various organophosphorous molecules. A putative acid phosphatase called FS6 was identified using genetic profiles and sequences from different environments. FS6 showed high sequence similarity to type C acid phosphatases and retained more than 30% of consensus residues in its protein sequence. A histidine-tagged recombinant FS6 produced in Escherichia coli exhibited extremophile properties, functioning effectively in a broad pH range between 3.5 and 8.5. The enzyme demonstrated optimal activity at temperatures between 25 and 50°C, with a melting temperature of 51.6°C. Kinetic parameters were determined using various substrates, and the reaction catalysed by FS6 with physiological substrates was at least 100-fold more efficient than with p-nitrophenyl phosphate. Furthermore, FS6 was found to be a decamer in solution, unlike the dimeric forms of crystallized proteins in its family.

Indexed as

Acid PhosphataseExtremophilesAmino Acid SequenceHydrogen-Ion ConcentrationHydrolysisSubstrate SpecificityAcid Phosphatase

Identifiers

PMID38588312
PMCPMC11001196

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.