Evidence map›Paper›PMID 38587769›Full record

ArticleJournal of imaging informatics in medicine2024

Automated Pulmonary Tuberculosis Severity Assessment on Chest X-rays.

Karthik Kantipudi, Jingwen Gu, Vy Bui, Hang Yu, Stefan Jaeger, Ziv Yaniv

Abstract read
In one paragraph

Article in Journal of imaging informatics in medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Hematochemical hallmarks as markers of pulmonary TB severity: A multicenter cross-sectional study.Journal of clinical tuberculosis and other mycobacterial diseases · 2025
    Article
  5. Semantic Segmentation of TB in Chest X-rays: a New Dataset and Generalization Evaluation.Proceedings of SPIE--the International Society for Optical Engineering · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Karthik KantipudiOffice of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases, Bethesda, 20892, MD, USA. karthik.kantipudi@nih.gov.ORCID http://orcid.org/0000-0002-6423-1647
Jingwen GuOffice of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases, Bethesda, 20892, MD, USA.ORCID http://orcid.org/0000-0003-2258-3131
Vy BuiLister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, 20894, MD, USA.ORCID http://orcid.org/0000-0001-5749-3756
Hang YuLister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, 20894, MD, USA.ORCID http://orcid.org/0000-0003-3426-3872
Stefan JaegerLister Hill National Center for Biomedical Communications, National Library of Medicine, Bethesda, 20894, MD, USA.ORCID http://orcid.org/0000-0001-6877-4318
Ziv YanivOffice of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases, Bethesda, 20892, MD, USA. zivyaniv@nih.gov.ORCID http://orcid.org/0000-0003-0315-7727

Funding

Applied Clinical InformaticsZIHLM010016 · NLM · NATIONAL LIBRARY OF MEDICINE · PI LYNCH, PAUL · 2021 to 2025
$36.5M
Enhancing the International Epidemiology Databases to Evaluate AIDS (IeDEA): A Pilot Study in Utilizing Machine Learning to Predict Treatment, Outcomes, and Phenotypes for HIV Patients Living with TBZIALM010026 · NLM · NATIONAL LIBRARY OF MEDICINE · PI JAEGER, STEFAN · 2024 to 2024
$238k
National Institute of Allergy and Infectious Diseases HHSN316201300006W/75N93022F00001Office of the Secretary Patient-Centered Outcomes Research Trust Fund 750119PE080057
6 · The paper itself

Abstract

According to the 2022 World Health Organization's Global Tuberculosis (TB) report, an estimated 10.6 million people fell ill with TB, and 1.6 million died from the disease in 2021. In addition, 2021 saw a reversal of a decades-long trend of declining TB infections and deaths, with an estimated increase of 4.5% in the number of people who fell ill with TB compared to 2020, and an estimated yearly increase of 450,000 cases of drug resistant TB. Estimating the severity of pulmonary TB using frontal chest X-rays (CXR) can enable better resource allocation in resource constrained settings and monitoring of treatment response, enabling prompt treatment modifications if disease severity does not decrease over time. The Timika score is a clinically used TB severity score based on a CXR reading. This work proposes and evaluates three deep learning-based approaches for predicting the Timika score with varying levels of explainability. The first approach uses two deep learning-based models, one to explicitly detect lesion regions using YOLOV5n and another to predict the presence of cavitation using DenseNet121, which are then utilized in score calculation. The second approach uses a DenseNet121-based regression model to directly predict the affected lung percentage and another to predict cavitation presence using a DenseNet121-based classification model. Finally, the third approach directly predicts the Timika score using a DenseNet121-based regression model. The best performance is achieved by the second approach with a mean absolute error of 13-14% and a Pearson correlation of 0.7-0.84 using three held-out datasets for evaluating generalization.

Indexed as

Radiography, ThoracicSeverity of Illness IndexTuberculosis, PulmonaryDeep LearningHumansLungRadiographic Image Interpretation, Computer-AssistedChest X-rayDeep learningPulmonary tuberculosisSeverity score

Identifiers

PMID38587769
PMCPMC11522209

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.