Evidence map›Paper›PMID 38582819›Full record

ArticleBiochemical genetics2025

Bioinformatics and Functional Analysis of OsASMT1 Gene in Response to Abiotic Stress.

Mingyu Li, Longying Wu, Yang Shi, Lijuan Wu, Farhan Afzal, Yanru Jia, Yanyan Huang, Binhua Hu, Ji Chen, Jin Huang

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Article in Biochemical genetics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Mingyu LiCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Longying WuCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Yang ShiCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Lijuan WuCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Farhan AfzalCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Yanru JiaCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China.
Yanyan HuangState Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, 61130, Sichuan, China.
Binhua HuInstitute of Biotechnology and Nuclear Technology, Sichuan Academy of Agricultural Sciences, Chengdu, 610066, Sichuan, China.
Ji ChenCollege of Agronomy, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China.
Jin HuangCollege of Ecology and Environment, Chengdu University of Technology, Chengdu, 610059, Sichuan, China. huangjin18@cdut.edu.cn.
Chengdu University of Technology · CNSichuan Agricultural University · CNSichuan Academy of Agricultural Sciences · CN

Funding

The Open Project Program of State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China SKL-KF202316The Sichuan Natural Science Foundation Project 2023NSFSC1270
6 · The paper itself

Abstract

The study aimed to elucidate the functional characteristics of OsASMT1 gene under copper (Cu) or sodium chloride (NaCl) stress. Bioinformatics scrutiny unveiled that OsASMT1 is situated on chromosome 9. Its protein architecture, comprising dimerization and methyltransferase domains, showed significant similarities to OsASMT2 and OsASMT3. High expression in roots and panicles, along with abiotic stress putative cis-regulatory elements in the promoter, indicated potential stress responsiveness. Real-time quantitative PCR confirmed OsASMT1 induction under Cu and NaCl stress in rice. Surprisingly, yeast expressing OsASMT1 did not exhibit enhanced resistance to abiotic stresses. The results of subcellular localization analysis indicated that OsASMT1 plays a role in the cytoplasm. While OsASMT1 responded to Cu and NaCl stress in rice, its heterologous expression in yeast failed to confer abiotic stress resistance, highlighting the need for further investigation of its functional implications.

Indexed as

OryzaPlant ProteinsStress, PhysiologicalComputational BiologyCopperGene Expression Regulation, PlantSaccharomyces cerevisiaeSodium ChlorideCopperPlant ProteinsSodium ChlorideAbiotic stressBioinformatics analysisFunctionRice gene

Identifiers

PMID38582819
OpenAlexW4394015128

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.