Evidence map›Paper›PMID 38582099›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2024

Integrative Single Cell Atlas Revealed Intratumoral Heterogeneity Generation from an Adaptive Epigenetic Cell State in Human Bladder Urothelial Carcinoma.

Yu Xiao, Wan Jin, Kaiyu Qian, Lingao Ju, Gang Wang, Kai Wu, Rui Cao, Luyuan Chang, Zilin Xu, Jun Luo and 17 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 11 citations in OpenAlex.

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  9. MRI based unsuperviced clustering on MIBC reveals intratumor heterogeneity phenotypes and neoadjuvant chemotherapy efficacy.Cancer imaging : the official publication of the International Cancer Imaging Society · 2026
    Article
  10. YBX1 Enhances the Stability of TM4SF1 in an mCombinatorial chemistry & high throughput screening · 2026
    Article
  11. Review
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 8 institutions in 1 country.

Yu XiaoDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Wan JinDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Kaiyu QianDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Lingao JuDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Gang WangDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Kai WuEuler Technology, Beijing, 102206, China.
Rui CaoDepartment of Urology, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Luyuan ChangEuler Technology, Beijing, 102206, China.
Zilin XuDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Jun LuoDepartment of Pathology, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Liuying ShanEuler Technology, Beijing, 102206, China.
Fang YuDepartment of Pathology, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Xintong ChenEuler Technology, Beijing, 102206, China.
Dongmei LiuEuler Technology, Beijing, 102206, China.
Hong CaoDepartment of Pathology, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Yejinpeng WangDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Xinyue CaoDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Wei ZhouHubei Key Laboratory of Medical Technology on Transplantation, Institute of Hepatobiliary Diseases of Wuhan University, Transplant Center of Wuhan University, Wuhan, 430071, China.
Diansheng CuiDepartment of Urology, Hubei Cancer Hospital, Wuhan, 430079, China.
Ye TianDepartment of Urology, Beijing Friendship Hospital, Capital Medical University, Beijing, 100050, China.
Chundong JiDepartment of Urology, The Affiliated Hospital of Panzhihua University, Panzhihua, 617099, China.
Yongwen LuoDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.
Xin HongDepartment of Urology, Peking University International Hospital, Beijing, 102206, China.
Fangjin ChenCenter for Quantitative Biology, School of Life Sciences, Peking University, Beijing, 100091, China.
Minsheng PengState Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650201, China.
Yi ZhangEuler Technology, Beijing, 102206, China.
Xinghuan WangDepartment of Urology, Hubei Key Laboratory of Urological Diseases, Department of Biological Repositories, Human Genetic Resources Preservation Center of Hubei Province, Zhongnan Hospital of Wuhan University, Wuhan, 430071, China.ORCID 0000-0003-3497-0024
Wuhan University · CNBeijing Institute of Technology · CNCapital Medical University · CNPeking University · CNHubei Cancer Hospital · CNKunming University · CNPanzhihua University · CNWuhan University of Technology · CN

Funding

National Natural Science Foundation of China 82172985National Natural Science Foundation of China 82273065Research Fund of Zhongnan Hospital of Wuhan University KY0100000109Research Fund of Zhongnan Hospital of Wuhan University SWYBK00-03Research Fund of Zhongnan Hospital of Wuhan University YYXKNLJS2024001Research Fund of Zhongnan Hospital of Wuhan University ZNJC201920Science and Technology Department of Hubei Province Key Project 2022EJD001Science and Technology Department of Hubei Province Key Project YYXKNL2022001
6 · The paper itself

Abstract

Intratumor heterogeneity (ITH) of bladder cancer (BLCA) contributes to therapy resistance and immune evasion affecting clinical prognosis. The molecular and cellular mechanisms contributing to BLCA ITH generation remain elusive. It is found that a TM4SF1-positive cancer subpopulation (TPCS) can generate ITH in BLCA, evidenced by integrative single cell atlas analysis. Extensive profiling of the epigenome and transcriptome of all stages of BLCA revealed their evolutionary trajectories. Distinct ancestor cells gave rise to low-grade noninvasive and high-grade invasive BLCA. Epigenome reprograming led to transcriptional heterogeneity in BLCA. During early oncogenesis, epithelial-to-mesenchymal transition generated TPCS. TPCS has stem-cell-like properties and exhibited transcriptional plasticity, priming the development of transcriptionally heterogeneous descendent cell lineages. Moreover, TPCS prevalence in tumor is associated with advanced stage cancer and poor prognosis. The results of this study suggested that bladder cancer interacts with its environment by acquiring a stem cell-like epigenomic landscape, which might generate ITH without additional genetic diversification.

Indexed as

Single-Cell AnalysisUrinary Bladder NeoplasmsCarcinoma, Transitional CellEpigenesis, GeneticEpithelial-Mesenchymal TransitionGenetic HeterogeneityHumansadaptive immunitybladder cancerintratumor heterogeneitysingle cellTM4SF1‐positive cancer subpopulation

Identifiers

PMID38582099
PMCPMC11200000
OpenAlexW4394008321

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.