Evidence map›Paper›PMID 38581685›Full record

ArticleCancer discovery2024

Spatial Architecture of Myeloid and T Cells Orchestrates Immune Evasion and Clinical Outcome in Lung Cancer.

Katey S S Enfield, Emma Colliver, Claudia Lee, Alastair Magness, David A Moore, Monica Sivakumar, Kristiana Grigoriadis, Oriol Pich, Takahiro Karasaki, Philip S Hobson and 25 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer discovery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
21.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 91 citations in OpenAlex.

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  10. Decoding T cell exhaustion in the tumour microenvironment.Experimental & molecular medicine · 2026
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35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 6 institutions in 5 countries.

Katey S S Enfield *Cancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-4551-6073
Emma Colliver *Cancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-1497-0740
Claudia Lee *Cancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0003-1715-2265
Alastair Magness *Cancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0001-9876-3863
David A MooreCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-6296-1312
Monica SivakumarCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0002-7935-5132
Kristiana GrigoriadisCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-8435-0176
Oriol PichCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-1956-1882
Takahiro KarasakiCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0001-6863-2360
Philip S HobsonFlow Cytometry, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0001-5117-2994
Dina LeviFlow Cytometry, The Francis Crick Institute, London, United Kingdom.ORCID 0009-0000-5149-3675
Selvaraju VeeriahCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0002-1217-0387
Clare PuttickCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0009-0006-3022-8737
Emma L NyeExperimental Histopathology, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0001-9154-3526
Mary GreenExperimental Histopathology, The Francis Crick Institute, London, United Kingdom.ORCID 0009-0000-7437-7706
Krijn K DijkstraCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-5417-5397
Masako ShimatoCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0001-9776-0935
Ayse U AkarcaDepartment of Cellular Pathology, University College London Hospitals, London, United Kingdom.ORCID 0000-0003-0629-3927
Teresa MarafiotiDepartment of Cellular Pathology, University College London Hospitals, London, United Kingdom.ORCID 0000-0003-1223-6275
Roberto SalgadoDepartment of Pathology, ZAS Hospitals, Antwerp, Belgium.ORCID 0000-0002-1110-3801
Allan HackshawCancer Research UK and University College London Cancer Trials Centre, London, United Kingdom.ORCID 0000-0002-5570-5070
TRACERx consortium
Mariam Jamal-HanjaniCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0003-1212-1259
Febe van MaldegemOncogene Biology Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-2544-544X
Nicholas McGranahanCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0001-9537-4045
Benjamin GlassPathAI, Inc., Boston, Massachusetts.ORCID 0000-0002-2386-2557
Hanna PulaskiPathAI, Inc., Boston, Massachusetts.ORCID 0000-0001-8092-0066
Eric WalkPathAI, Inc., Boston, Massachusetts.ORCID 0009-0004-4776-4339
James L ReadingCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0001-5381-978X
Sergio A QuezadaCancer Research UK Lung Cancer Centre of Excellence, University College London Cancer Institute, London, United Kingdom.ORCID 0000-0002-9763-1700
Crispin T HileyCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-5869-0775
Julian Downward *Oncogene Biology Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-2331-4729
Erik Sahai *Tumour Cell Biology Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-3932-5086
Charles Swanton *Cancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-4299-3018
Mihaela AngelovaCancer Evolution and Genome Instability Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-0495-9695
The Francis Crick Institute · GBUniversity College Hospital · GBBoston Engineering (United States) · USCancer Research UK · GBCRUK Lung Cancer Centre of Excellence · GBPeter MacCallum Cancer Centre · AU

Funding

Amsterdam University Medical Centers (AUMC) Amsterdam UMC FellowshipBreast Cancer Research Foundation (BCRF) BCRF-22-157Cancer Research UK 17786Cancer Research UK 30025Cancer Research UK CC2040Cancer Research UK CC2041Cancer Research UK CTUQQR-DEC22/100009Cancer Research UK (CRUK) C11496/A17786Cancer Research UK (CRUK) C416/A21999Cancer Research UK (CRUK) CRUK Cancer Immunotherapy Catalyst NetworkCancer Research UK (CRUK) Grant EDDPMA-Nov21/100034CRUK Lung Cancer Centre of Excellence (CRUKLungCentre)CRUK Lung Cancer Centre of Excellence (CRUKLungCentre) C11496/A30025European Research Council 835297European Research Council (ERC) 101019366HORIZON EUROPE European Research Council (ERC) 101079113HORIZON EUROPE European Research Council (ERC) 835297HORIZON EUROPE Marie Sklodowska-Curie Actions (MSCA) 101024529HORIZON EUROPE Marie Sklodowska-Curie Actions (MSCA) 838540Japan Society for the Promotion of Science London (JSPS) 202060447Mark Foundation For Cancer Research (The Mark Foundation for Cancer Research) 23-034-ASPMark Foundation For Cancer Research (The Mark Foundation for Cancer Research) Grant 21-029-ASPMark Foundation For Cancer Research (The Mark Foundation for Cancer Research) MFCR ASPIRE 2022- 0384Novo Nordisk Foundation Center for Basic Metabolic Research (NovoNordisk Foundation Center for Basic Metabolic Research) ID16584Rosetrees Trust (Rosetrees)Royal Society (The Royal Society) 211179/Z/18/ZRoyal Society (The Royal Society) RF\ERE\210216Royal Society (The Royal Society) RF\ERE\231118Royal Society (The Royal Society) RP/EA/180007Stand Up To Cancer (SU2C) SU2C-AACR-DT23-17UCLH Biomedical Research Centre (UCL)Wellcome Trust 211179Wellcome Trust CC2040Wellcome Trust CC2041Wellcome Trust (WT) 211179/Z/18/ZZonMw (Netherlands Organisation for Health Research and Development) 20-45200-98-20102
6 · The paper itself

Abstract

Understanding the role of the tumor microenvironment (TME) in lung cancer is critical to improving patient outcomes. We identified four histology-independent archetype TMEs in treatment-naïve early-stage lung cancer using imaging mass cytometry in the TRACERx study (n = 81 patients/198 samples/2.3 million cells). In immune-hot adenocarcinomas, spatial niches of T cells and macrophages increased with clonal neoantigen burden, whereas such an increase was observed for niches of plasma and B cells in immune-excluded squamous cell carcinomas (LUSC). Immune-low TMEs were associated with fibroblast barriers to immune infiltration. The fourth archetype, characterized by sparse lymphocytes and high tumor-associated neutrophil (TAN) infiltration, had tumor cells spatially separated from vasculature and exhibited low spatial intratumor heterogeneity. TAN-high LUSC had frequent PIK3CA mutations. TAN-high tumors harbored recently expanded and metastasis-seeding subclones and had a shorter disease-free survival independent of stage. These findings delineate genomic, immune, and physical barriers to immune surveillance and implicate neutrophil-rich TMEs in metastasis. SIGNIFICANCE: This study provides novel insights into the spatial organization of the lung cancer TME in the context of tumor immunogenicity, tumor heterogeneity, and cancer evolution. Pairing the tumor evolutionary history with the spatially resolved TME suggests mechanistic hypotheses for tumor progression and metastasis with implications for patient outcome and treatment. This article is featured in Selected Articles from This Issue, p. 897.

Indexed as

Lung NeoplasmsTumor MicroenvironmentFemaleHumansImmune EvasionMaleMyeloid CellsT-Lymphocytes

Identifiers

PMID38581685
PMCPMC11145179
OpenAlexW4394014345

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.