Evidence map›Paper›PMID 38581045›Full record

ArticleVirology journal2024

A macrophage-cell model of HIV latency reveals the unusual importance of the bromodomain axis.

Javan K Kisaka, Daniel Rauch, Malachi Griffith, George B Kyei

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Javan K KisakaDepartment of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO, 63110, USA.
Daniel RauchDepartment of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO, 63110, USA.
Malachi GriffithDepartment of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO, 63110, USA.
George B KyeiDepartment of Medicine, Washington University School of Medicine in St. Louis, St. Louis, MO, 63110, USA. g.kyei@wustl.edu.
Washington University in St. Louis · USJames S. McDonnell Foundation · US

Funding

Washington University Center for Cellular ImagingP30CA091842 · NCI · WASHINGTON UNIVERSITY · PI AIMEE S JAMES · 2001 to 2026
$128.0M
WU INSTITUTE OF CLINICAL AND TRANSLATIONAL SCIENCESUL1TR002345 · NCATS · WASHINGTON UNIVERSITY · PI William G. Powderly · 2017 to 2026
$97.8M
Protein interactions regulating HIV replication in macrophagesR01AI155120 · NIAID · WASHINGTON UNIVERSITY · PI KYEI, GEORGE · 2021 to 2024
$1.6M
Control of HIV replication by interactions between SF3B1 and TatR21AI155166 · NIAID · WASHINGTON UNIVERSITY · PI KYEI, GEORGE · 2021 to 2022
$433k
NCATS NIH HHS UL1 TR002345NCI NIH HHS P30 CA091842NIAID NIH HHS R01 AI155120NIAID NIH HHS R21 AI155166NIH HHS AI155120-01A1 and R21 AI 155166 - 01 A1
6 · The paper itself

Abstract

backgroundAlthough macrophages are now recognized as an essential part of the HIV latent reservoir, whether and how viral latency is established and reactivated in these cell types is poorly understood. To understand the fundamental mechanisms of viral latency in macrophages, there is an urgent need to develop latency models amenable to genetic manipulations and screening for appropriate latency-reversing agents (LRAs). Given that differentiated THP-1 cells resemble monocyte-derived macrophages in HIV replication mechanisms, we set out to establish a macrophage cell model for HIV latency using THP-1 cells.

methodsWe created single-cell clones of THP-1 cells infected with a single copy of the dual-labeled HIV

resultsWe obtained clones of THP-1 cells with latently infected HIV with unique integration sites. When the differentiated THP-1 or primary MDMs cells were treated with various LRAs, the bromodomain inhibitors JQ1 and I-BET151 were the most potent compounds. Knockdown of BRD4, the target of JQ1, resulted in increased reactivation, thus confirming the pharmacological effect. The DYRK1A inhibitor Harmine and lipopolysaccharide (LPS) also showed significant reactivation across all three MDM donors. Remarkably, LRAs like PMA/ionomycin, bryostatin-1, and histone deacetylase inhibitors known to potently reactivate latent HIV in CD4 + T cells showed little activity in macrophages.

conclusionsOur results indicate that this model could be used to screen for appropriate LRAs for macrophages and show that HIV latency and reactivation mechanisms in macrophages may be distinct from those of CD4 + T cells.

Indexed as

HIV-1HIV InfectionsBromodomain Containing ProteinsCD4-Positive T-LymphocytesCell Cycle ProteinsHumansMacrophagesNuclear ProteinsTranscription FactorsVirus ActivationVirus LatencyBRD4 protein, humanBromodomain Containing ProteinsCell Cycle ProteinsNuclear ProteinsTranscription FactorsCell line modelHIVLatencyLatency-reversing agentsMacrophagesTHP-1

Identifiers

PMID38581045
PMCPMC10996205
OpenAlexW4393981435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.