Evidence map›Paper›PMID 38580941›Full record

ArticleBMC plant biology2024

Genome-wide investigation of UDP-Glycosyltransferase family in Tartary buckwheat (Fagopyrum tataricum).

Fan Yang, Lei Zhang, Xiao Zhang, Jingru Guan, Bo Wang, Xiaoying Wu, Minli Song, Aili Wei, Zhang Liu, Dongao Huo

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 11 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Fan YangCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Lei ZhangCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Xiao ZhangCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Jingru GuanCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Bo WangMARA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.
Xiaoying WuCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Minli SongCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Aili WeiCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China.
Zhang LiuCenter for Agricultural Genetic Resources Research, Shanxi Agricultural University, Taiyuan, 030031, China.
Dongao HuoCollege of Biological Sciences and Technology, Taiyuan Normal University, Taiyuan, 030619, China. dongaohuo@tynu.edu.cn.
Taiyuan Normal University · CNHuazhong Agricultural University · CNShanxi Agricultural University · CN

Funding

Basic Research Program of Shanxi Province 20210302124365, 20210302124235, 202203021222242Critical Talent Workstation Project TYSGJ202201National Key R&D Program of China 2019YFD1001300, 2019YFD1001303National Natural Science Foundation of China 31960415
6 · The paper itself

Abstract

backgroundTartary buckwheat (Fagopyrum tataricum) belongs to Polygonaceae family and has attracted increasing attention owing to its high nutritional value. UDP-glycosyltransferases (UGTs) glycosylate a variety of plant secondary metabolites to control many metabolic processes during plant growth and development. However, there have been no systematic reports of UGT superfamily in F. tataricum.

resultsWe identified 173 FtUGTs in F. tataricum based on their conserved UDPGT domain. Phylogenetic analysis of FtUGTs with 73 Arabidopsis UGTs clustered them into 21 families. FtUGTs from the same family usually had similar gene structure and motif compositions. Most of FtUGTs did not contain introns or had only one intron. Tandem repeats contributed more to FtUGTs amplification than segmental duplications. Expression analysis indicates that FtUGTs are widely expressed in various tissues and likely play important roles in plant growth and development. The gene expression analysis response to different abiotic stresses showed that some FtUGTs were involved in response to drought and cadmium stress. Our study provides useful information on the UGTs in F. tataricum, and will facilitate their further study to better understand their function.

conclusionsOur results provide a theoretical basis for further exploration of the functional characteristics of FtUGTs and for understanding the growth, development, and metabolic model in F. tataricum.

Indexed as

FagopyrumGene Expression Regulation, PlantGlycosyltransferasesHumansPhylogenyPlant ProteinsGlycosyltransferasesPlant ProteinsExpression patternFagopyrum tataricumGenome-wide analysisUGT

Identifiers

PMID38580941
PMCPMC10998406
OpenAlexW4394012566

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.