Evidence map›Paper›PMID 38580753›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2024

CDC167 exhibits potential as a biomarker for airway inflammation in asthma.

Yukai Zhong, Qiong Wu, Li Cai, Yuanjing Chen, Qi Shen

Abstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yukai Zhong *Department of Pediatrics, Kongjiang Hospital of Shanghai Yangpu District, Shanghai, 200093, China.
Qiong Wu *Department of Respiratory, Kongjiang Hospital of Shanghai Yangpu District, No. 480 Shuang Yang Road, Yangpu District, Shanghai, 200093, China.
Li CaiDepartment of Colorectal Surgery, Kongjiang Hospital of Shanghai Yangpu District, Shanghai, 200093, China.
Yuanjing ChenDepartment of Respiratory, Kongjiang Hospital of Shanghai Yangpu District, No. 480 Shuang Yang Road, Yangpu District, Shanghai, 200093, China. chenyujish@163.com.
Qi ShenDepartment of Geriatric Medicine, Tongji University Affiliated Yangpu Hospital, No. 450 Teng Yue Road, Yangpu District, Shanghai, 200090, China. shenqi301@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Current asthma treatments have been discovered to decrease the risk of disease progression. Herein, we aimed to characterize novel potential therapeutic targets for asthma. Differentially expressed genes (DEGs) for GSE64913 and GSE137268 datasets were characterized. Weighted correlation network analysis (WGCNA) was used to identify trait-related module genes within the GSE67472 dataset. The intersection of the module genes of interest, as well as the DEGs, comprised the key module genes that underwent additional candidate gene screening using machine learning. In addition, a bioinformatics-based approach was used to analyze the relative expression levels, diagnostic values, and reverently enriched pathways of the screened candidate genes. Furthermore, the candidate genes were silenced in asthmatic mice, and the inflammation and lung injury in the mice were validated. A total of 1710 DEGs were characterized in GSE64913 and GSE137268 for asthma patients. WGCNA identified 2367 asthma module genes, of which 285 overlapped with 1710 DEGs. Four candidate genes, CDC167, POSTN, SEC14L1, and SERPINB2, were validated using the intersection genes of three machine learning algorithms, including Least Absolute Shrinkage and Selection Operator, Random Forest, and Support Vector Machine. All the candidate genes were significantly upregulated in asthma patients and demonstrated diagnostic utility for asthma. Furthermore, silencing CDC167 reduced the levels of inflammatory cytokines significantly and alleviated lung injury in ovalbumin (OVA)-induced asthmatic mice. Our study demonstrated that CDC167 exhibits potential as diagnostic markers and therapeutic targets for asthma patients.

Indexed as

AsthmaBiomarkersAnimalsComputational BiologyDisease Models, AnimalFemaleGene Expression ProfilingGene Regulatory NetworksHumansInflammationMiceBiomarkers

Identifiers

PMID38580753
PMCPMC11130062

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.