Evidence map›Paper›PMID 38580324›Full record

ArticleThe journal of physical chemistry letters2024

Entropy Tug-of-War Determines Solvent Effects in the Liquid-Liquid Phase Separation of a Globular Protein.

Saumyak Mukherjee, Sashary Ramos, Simone Pezzotti, Abhishek Kalarikkal, Tobias M Prass, Laura Galazzo, Dominik Gendreizig, Natercia Barbosa, Enrica Bordignon, Martina Havenith and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The Polymers of Life: Exploring Cellular Function Through Polymer Concepts.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. A molecular grammar for programmable multiphase protein-RNA vesicles.bioRxiv : the preprint server for biology · 2026
    Article
  6. Hydraulic Activation of the AsLOV2 Photoreceptor.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. All-atom simulations of biomolecular condensates.Current opinion in structural biology · 2025
    Review
  11. Article
  12. Protein Crowding Effects on Hydration Water Dynamics.The journal of physical chemistry letters · 2025
    Article
  13. Unraveling the hydration dynamics of ACCBiophysical journal · 2024
    Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Saumyak MukherjeeCenter for Theoretical Chemistry, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0003-2196-3423
Sashary RamosDepartment of Physical Chemistry II, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0001-7215-6993
Simone PezzottiDepartment of Physical Chemistry II, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0003-2023-3648
Abhishek KalarikkalFaculty of Chemistry and Biochemistry, Ruhr University Bochum, D-44780 Bochum, Germany.
Tobias M PrassCenter for Theoretical Chemistry, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0009-0000-6450-5364
Laura GalazzoFaculty of Chemistry and Biochemistry, Ruhr University Bochum, D-44780 Bochum, Germany.
Dominik GendreizigDepartment of Physical Chemistry, University of Geneva, Quai Ernest Ansermet 30, 1211 Geneva, Switzerland.
Natercia BarbosaDepartment of Physical Chemistry, University of Geneva, Quai Ernest Ansermet 30, 1211 Geneva, Switzerland.
Enrica BordignonFaculty of Chemistry and Biochemistry, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0003-2450-5161
Martina HavenithDepartment of Physical Chemistry II, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0001-8475-5037
Lars V SchäferCenter for Theoretical Chemistry, Ruhr University Bochum, D-44780 Bochum, Germany.ORCID 0000-0002-8498-3061
Ruhr University Bochum · DEUniversity of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liquid-liquid phase separation (LLPS) plays a key role in the compartmentalization of cells via the formation of biomolecular condensates. Here, we combined atomistic molecular dynamics (MD) simulations and terahertz (THz) spectroscopy to determine the solvent entropy contribution to the formation of condensates of the human eye lens protein γD-Crystallin. The MD simulations reveal an entropy tug-of-war between water molecules that are released from the protein droplets and those that are retained within the condensates, two categories of water molecules that were also assigned spectroscopically. A recently developed THz-calorimetry method enables quantitative comparison of the experimental and computational entropy changes of the released water molecules. The strong correlation mutually validates the two approaches and opens the way to a detailed atomic-level understanding of the different driving forces underlying the LLPS.

Indexed as

Phase SeparationWaterCalorimetryEntropyHumansSolventsSolventsWater

Identifiers

PMID38580324
PMCPMC11033941
OpenAlexW4393976278

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.