Evidence map›Paper›PMID 38579923›Full record

ArticleChemico-biological interactions2024

Substitution of both histidines in the active site of yeast alcohol dehydrogenase 1 exposes underlying pH dependencies.

Tobias Jacobi, Darla Ann Kratzer, Bryce V Plapp

Open access · greenAbstract read
In one paragraph

Article in Chemico-biological interactions, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tobias JacobiDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA 52242, USA.
Darla Ann KratzerDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA 52242, USA. Electronic address: pastorkratzer@gmail.com.
Bryce V PlappDepartment of Biochemistry and Molecular Biology, The University of Iowa, Iowa City, IA 52242, USA. Electronic address: Tobias.Jacobi@mkuem.rlp.de.
University of Iowa · US

Funding

SPECIFICITY OF ALCOHOL DEHYDROGENASESR01AA000279 · NIAAA · UNIVERSITY OF IOWA · PI PLAPP, BRYCE V · 1985 to 2004
$1.4M
NIAAA NIH HHS R01 AA000279
6 · The paper itself

Abstract

Histidine residues 44 and 48 in yeast alcohol dehydrogenase (ADH) bind to the coenzymes NAD(H) and contribute to catalysis. The individual H44R and H48Q substitutions alter the kinetics and pH dependencies, and now the roles of other ionizable groups in the enzyme were studied in the doubly substituted H44R/H48Q ADH. The substitutions make the enzyme more resistant to inactivation by diethyl pyrocarbonate, modestly improve affinity for coenzymes, and substantially decrease catalytic efficiencies for ethanol oxidation and acetaldehyde reduction. The pH dependencies for several kinetic parameters are shifted from pK values for wild-type ADH of 7.3-8.1 to values for H44R/H48Q ADH of 8.0-9.6, and are assigned to the water or alcohol bound to the catalytic zinc. It appears that the rate of binding of NAD

Indexed as

Alcohol DehydrogenaseCatalytic DomainHistidineSaccharomyces cerevisiaeAcetaldehydeAmino Acid SubstitutionDiethyl PyrocarbonateEthanolHydrogen-Ion ConcentrationKineticsNADOxidation-ReductionSaccharomyces cerevisiae ProteinsZincAcetaldehydeADH1 protein, S cerevisiaeAlcohol DehydrogenaseDiethyl PyrocarbonateEthanolHistidineNADSaccharomyces cerevisiae ProteinsZincDiethyl pyrocarbonateEnzyme catalysisEnzyme mechanismMutagenesispH dependence

Identifiers

PMID38579923
PMCPMC11090211
OpenAlexW4393946784

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.