Evidence map›Paper›PMID 38578996›Full record

ArticleScience advances2024

Structural and quantum chemical basis for OCP-mediated quenching of phycobilisomes.

Paul V Sauer, Lorenzo Cupellini, Markus Sutter, Mattia Bondanza, María Agustina Domínguez Martin, Henning Kirst, David Bína, Adrian Fujiet Koh, Abhay Kotecha, Basil J Greber and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Atomistic simulations reveal the photoactivation mechanism of a carotenoid-binding photoreceptor.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Phycobilisome core architecture influences photoprotective quenching by the Orange Carotenoid Protein.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 5 countries.

Paul V SauerCalifornia Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA.ORCID 0000-0001-7204-5863
Lorenzo CupelliniDipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, I-56124 Pisa, Italy.ORCID 0000-0003-0848-2908
Markus SutterMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0001-6290-4820
Mattia BondanzaDipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, I-56124 Pisa, Italy.ORCID 0000-0001-6254-3957
María Agustina Domínguez MartinMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0002-3500-2052
Henning KirstEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.ORCID 0000-0002-6982-4345
David BínaFaculty of Science, University of South Bohemia, Ceske Budejovice, Czech Republic.ORCID 0000-0002-9259-4218
Adrian Fujiet KohThermo Fisher Scientific, Eindhoven, Netherlands.ORCID 0000-0001-6682-4449
Abhay KotechaThermo Fisher Scientific, Eindhoven, Netherlands.ORCID 0000-0002-4480-5439
Basil J GreberDivision of Structural Biology, The Institute of Cancer Research, London SW7 3RP, UK.ORCID 0000-0001-9379-7159
Eva NogalesCalifornia Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA.ORCID 0000-0001-9816-3681
Benedetta MennucciDipartimento di Chimica e Chimica Industriale, Università di Pisa, Via G. Moruzzi 13, I-56124 Pisa, Italy.ORCID 0000-0002-4394-0129
Cheryl A KerfeldMSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0002-9977-8482
Lawrence Berkeley National Laboratory · USUniversity of Pisa · ITQB3 · USThermo Fisher Scientific (Netherlands) · NLInstitute of Cancer Research · GBSewanee: The University of the South · USUniversity of South Bohemia in České Budějovice · CZ

Funding

Structural studies of function and regulation of microtubules and transcriptional gene expression machineryR35GM127018 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Eva Nogales · 2018 to 2026
$4.3M
NIGMS NIH HHS R35 GM127018
6 · The paper itself

Abstract

Cyanobacteria use large antenna complexes called phycobilisomes (PBSs) for light harvesting. However, intense light triggers non-photochemical quenching, where the orange carotenoid protein (OCP) binds to PBS, dissipating excess energy as heat. The mechanism of efficiently transferring energy from phycocyanobilins in PBS to canthaxanthin in OCP remains insufficiently understood. Using cryo-electron microscopy, we unveiled the OCP-PBS complex structure at 1.6- to 2.1-angstrom resolution, showcasing its inherent flexibility. Using multiscale quantum chemistry, we disclosed the quenching mechanism. Identifying key protein residues, we clarified how canthaxanthin's transition dipole moment in its lowest-energy dark state becomes large enough for efficient energy transfer from phycocyanobilins. Our energy transfer model offers a detailed understanding of the atomic determinants of light harvesting regulation and antenna architecture in cyanobacteria.

Indexed as

CyanobacteriaPhycobilisomesBacterial ProteinsCanthaxanthinCryoelectron MicroscopyBacterial ProteinsCanthaxanthinPhycobilisomes

Identifiers

PMID38578996
PMCPMC10997198
OpenAlexW4393998993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.