Evidence map›Paper›PMID 38578603›Full record

ArticleJournal of assisted reproduction and genetics2024

PGT-M for spinocerebellar ataxia type 1: development of a STR panel and a report of two clinical cases.

Elena V Soloveva, Maria M Skleimova, Larisa I Minaycheva, Anna F Garaeva, Daria I Zhigalina, Egor O Churkin, Yulia V Okkel, Oksana S Timofeeva, Ilya A Petrov, Gulnara N Seitova and 2 more

Open access · hybridAbstract readCase Reports
In one paragraph

Article in Journal of assisted reproduction and genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Elena V SolovevaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia. elena.soloveva@medgenetics.ru.ORCID http://orcid.org/0009-0003-2972-3253
Maria M SkleimovaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.ORCID http://orcid.org/0009-0002-3843-3146
Larisa I MinaychevaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.ORCID http://orcid.org/0000-0002-1752-2521
Anna F GaraevaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.
Daria I ZhigalinaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.ORCID http://orcid.org/0000-0003-2800-8875
Egor O ChurkinART Center of the Siberian State Medical University of the Ministry of Health of Russia, Tomsk, Russia.
Yulia V OkkelART Center of the Siberian State Medical University of the Ministry of Health of Russia, Tomsk, Russia.
Oksana S TimofeevaART Center of the Siberian State Medical University of the Ministry of Health of Russia, Tomsk, Russia.ORCID http://orcid.org/0000-0002-5768-4031
Ilya A PetrovART Center of the Siberian State Medical University of the Ministry of Health of Russia, Tomsk, Russia.ORCID http://orcid.org/0000-0002-0697-3896
Gulnara N SeitovaResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.
Igor N LebedevResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.ORCID http://orcid.org/0000-0002-0482-8046
Vadim A StepanovResearch Institute of Medical Genetics, Tomsk National Research Medical Center of the Russian Academy of Sciences, Tomsk, Russia.ORCID http://orcid.org/0000-0002-5166-331X
Russian Academy of Sciences · RUSiberian State Medical University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeTo present the developed preimplantation genetic testing (PGT) for spinocerebellar ataxia type 1 (SCA1) and the outcomes of IVF with PGT.

methodsPGT was performed for two unrelated couples from the Republic of Sakha (Yakutia) with the risk of SCA1 in one spouse. We have developed a system for PGT of a monogenic disease (PGT-M) for SCA1, which includes the analysis of a panel of 11 polymorphic STR markers linked to the ATXN1 gene and a pathogenic variant of the ATXN1 gene using nested PCR and fragment analysis. IVF/ICSI programs were performed according to standard protocols. Multiple displacement amplification (MDA) was used for whole genome amplification (WGA) and array comparative genomic hybridization (aCGH) for aneuploidy testing (PGT-A).

resultsEight STRs were informative for the first couple and ten for the second. Similarity of the haplotypes carrying pathogenic variants of the ATXN1 gene was noted. In the first case, during IVF/ICSI-PGT, three embryos reached the blastocyst stage and were biopsied. One embryo was diagnosed as normal by maternal STR haplotype and the ATXN1 allele. PGT-A revealed euploidy. The embryo transfer resulted in a singleton pregnancy, and a healthy boy was born. Postnatal diagnosis confirmed normal ATXN1. In the second case, two blastocysts were biopsied. Both were diagnosed as normal by PGT-M, but PGT-A revealed aneuploidy.

conclusionBirth of a healthy child after PGT for SCA1 was the first case of successful preimplantation prevention of SCA1 for the Yakut couple and the first case of successful PGT for SCA1 in Russia.

Indexed as

Ataxin-1Microsatellite RepeatsPreimplantation DiagnosisSpinocerebellar AtaxiasAdultAneuploidyComparative Genomic HybridizationEmbryo TransferFemaleFertilization in VitroGenetic TestingHumansMalePregnancyAtaxin-1ATXN1 protein, humanATXN1 linked haplotypePreimplantation genetic testing for aneuploidy (PGT-A)Preimplantation genetic testing for monogenic diseases (PGT-M)Spinocerebellar ataxia type 1 (SCA1)STR markers

Identifiers

PMID38578603
PMCPMC11143087
OpenAlexW4393990542

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.