Evidence map›Paper›PMID 38578019›Full record

ArticleImmunity, inflammation and disease2024

Analysis of network expression and immune infiltration of disulfidptosis-related genes in chronic obstructive pulmonary disease.

Yanqun Liu, Tao Zhu, Juan Wang, Yan Cheng, Qiang Zeng, Zhangqiang You, Guangming Dai

Open access · goldAbstract read
In one paragraph

Article in Immunity, inflammation and disease, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Yanqun LiuThe No. 1 Department of Gerontology, The Third Hospital of Mianyang, Sichuan Mental Health Center/The Third Hospital of Mianyang (Sichuan Mental Health Center), Mianyang, China.
Tao ZhuRespiratory Medicine and Critical Care Medicine, Suining Central Hospital, Suining, China.
Juan WangThe No. 1 Department of Gerontology, The Third Hospital of Mianyang, Sichuan Mental Health Center/The Third Hospital of Mianyang (Sichuan Mental Health Center), Mianyang, China.
Yan ChengThe No. 1 Department of Gerontology, The Third Hospital of Mianyang, Sichuan Mental Health Center/The Third Hospital of Mianyang (Sichuan Mental Health Center), Mianyang, China.
Qiang ZengThe No. 1 Department of Gerontology, The Third Hospital of Mianyang, Sichuan Mental Health Center/The Third Hospital of Mianyang (Sichuan Mental Health Center), Mianyang, China.
Zhangqiang YouEcological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal University, Mianyang, China.
Guangming DaiDepartment of Geriatrics, First People's Hospital of Suining City, Suining, China.ORCID 0000-0002-5765-7703
Mianyang Third People's Hospital · CNFirst People's Hospital of Nanning · CNMianyang Normal University · CNSuizhou Central Hospital · CN

Funding

Chongqing Health Joint Medical Research Project 2020MSXM112
6 · The paper itself

Abstract

backgroundChronic obstructive pulmonary disease (COPD) is a globally prevalent respiratory disease, and programmed cell death plays a pivotal role in the development of COPD. Disulfidptosis is a newly discovered type of cell death that may be associated with the progression of COPD. However, the expression and role of disulfidptosis-related genes (DRGs) in COPD remain unclear.

methodsThe expression of DRGs was identified by analyzing RNA sequencing (RNA-seq) data in COPD. Further, COPD patients were classified into two subtypes by unsupervised cluster analysis to reveal their differences in gene expression and immune infiltration. Meanwhile, hub genes associated with disulfidptosis were screened by weighted gene co-expression network analysis. Subsequently, the hub genes were validated experimentally in cells and animals. In addition, we screened potential therapeutic drugs through the hub genes.

resultsWe identified two distinct molecular clusters and observed significant differences in immune cell populations between them. In addition, we screened nine hub genes, and experimental validation showed that CDC71, DOHH, PDAP1, and SLC25A39 were significantly upregulated in cigarette smoke-induced COPD mouse lung tissues and bronchial epithelial cells (BEAS-2B) treated with cigarette smoke extract. Finally, we predicted 10 potential small molecule drugs such as Atovaquone, Taurocholic acid, Latamoxef, and Methotrexate.

conclusionWe highlighted the strong association between COPD and disulfidptosis, with DRGs demonstrating a discriminative capacity for COPD. Additionally, the expression of certain novel genes, including CDC71, DOHH, PDAP1, and SLC25A39, is linked to COPD and may aid in the diagnosis and assessment of this condition.

Indexed as

Pulmonary Disease, Chronic ObstructiveAnimalsApoptosisAtovaquoneCluster AnalysisEpithelial CellsHumansIntercellular Signaling Peptides and ProteinsMiceAtovaquoneIntercellular Signaling Peptides and ProteinsPDAP1 protein, humanchronic obstructive pulmonary diseasedisulfidptosisimmune responsemolecular clusters

Identifiers

PMID38578019
PMCPMC10996381
OpenAlexW4393992430

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.