Evidence map›Paper›PMID 38577978›Full record

ArticleG3 (Bethesda, Md.)2024

Validation of positional candidates Rps6ka6 and Pou3f4 for a locus associated with skeletal muscle mass variability.

Konstantinos Lekkos, Afra A Bhuiyan, Abdullah M K Albloshi, Paige M Brooks, Thomas M Coate, Arimantas Lionikas

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Konstantinos LekkosSchool of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen AB25 2ZD, UK.
Afra A BhuiyanSchool of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen AB25 2ZD, UK.
Abdullah M K AlbloshiSchool of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen AB25 2ZD, UK.
Paige M BrooksDepartment of Biology, Georgetown University, Washington, DC 20057, USA.
Thomas M CoateDepartment of Biology, Georgetown University, Washington, DC 20057, USA.
Arimantas LionikasSchool of Medicine, Medical Sciences and Nutrition, University of Aberdeen, Aberdeen AB25 2ZD, UK.
University of Aberdeen · GBGeorgetown University · US

Funding

Translational Biomedical Science Training GrantTL1TR001431 · NCATS · GEORGETOWN UNIVERSITY · PI LEE, DEXTER L, SANDBERG, KATHRYN L · 2015 to 2024
$4.8M
Cellular and Molecular Mechanisms of Cochlear InnervationR01DC016595 · NIDCD · GEORGETOWN UNIVERSITY · PI Thomas M Coate · 2018 to 2026
$4.4M
Genetic Variation of Muscle MassR01AR056280 · NIAMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI BLIZARD, DAVID ARTHUR · 2009 to 2013
$1.3M
Dissection of Muscle Weight QTL Via Congenic StrainsR03AR052879 · NIAMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI LIONIKAS, ARIMANTAS · 2007 to 2008
$144k
Pou3f4-expressing Otic Mesenchyme Cells: A Novel Influence for Spiral Ganglion Neuron SurvivalF31DC019824 · NIDCD · GEORGETOWN UNIVERSITY · PI BROOKS, PAIGE M · 2021 to 2021
$33k
Chief Scientist Office 21/019Chief Scientist Office CGA/18/05NCATS NIH HHS TL1 TR001431NIAMS NIH HHS 249156NIAMS NIH HHS R01 AR056280NIAMS NIH HHS R03 AR052879NIDCD NIH HHS F31 DC019824NIDCD NIH HHS R01 DC016595NIH HHSWellcome TrustWellcome Trust 204815/Z/16/ZWellcome Trust TL1TR001431
6 · The paper itself

Abstract

Genetic variability significantly contributes to individual differences in skeletal muscle mass; however, the specific genes involved in that process remain elusive. In this study, we examined the role of positional candidates, Rps6ka6 and Pou3f4, of a chromosome X locus, implicated in muscle mass variability in CFW laboratory mice. Histology of hindlimb muscles was studied in CFW male mice carrying the muscle "increasing" allele C (n = 15) or "decreasing" allele T (n = 15) at the peak marker of the locus, rs31308852, and in the Pou3f4y/- and their wild-type male littermates. To study the role of the Rps6ka6 gene, we deleted exon 7 (Rps6ka6-ΔE7) using clustered regularly interspaced palindromic repeats-Cas9 based method in H2Kb myogenic cells creating a severely truncated RSK4 protein. We then tested whether that mutation affected myoblast proliferation, migration, and/or differentiation. The extensor digitorum longus muscle was 7% larger (P < 0.0001) due to 10% more muscle fibers (P = 0.0176) in the carriers of the "increasing" compared with the "decreasing" CFW allele. The number of fibers was reduced by 15% (P = 0.0268) in the slow-twitch soleus but not in the fast-twitch extensor digitorum longus (P = 0.2947) of Pou3f4y/- mice. The proliferation and migration did not differ between the Rps6ka6-ΔE7 and wild-type H2Kb myoblasts. However, indices of differentiation (myosin expression, P < 0.0001; size of myosin-expressing cells, P < 0.0001; and fusion index, P = 0.0013) were significantly reduced in Rps6ka6-ΔE7 cells. This study suggests that the effect of the X chromosome locus on muscle fiber numbers in the fast-twitch extensor digitorum longus is mediated by the Rps6ka6 gene, whereas the Pou3f4 gene affects fiber number in slow-twitch soleus.

Indexed as

Muscle, SkeletalPOU Domain FactorsRibosomal Protein S6 Kinases, 90-kDaAllelesAnimalsCell DifferentiationCell MovementCell ProliferationGenetic LociMaleMiceMyoblastsNerve Tissue ProteinsNerve Tissue ProteinsPou3f4 protein, mousePOU Domain FactorsRibosomal Protein S6 Kinases, 90-kDaRps6ka6 protein, mousemuscle fibersmyogenesisRSK4

Identifiers

PMID38577978
PMCPMC11075558
OpenAlexW4393992166

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.