Evidence map›Paper›PMID 38577581›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2023

A Video Transformer Network for Thyroid Cancer Detection on Hyperspectral Histologic Images.

Minh Ha Tran, Ofelia Gomez, Baowei Fei

Abstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. An automatic processing framework for hyperspectral histologic images and benchmark dataset.Proceedings of SPIE--the International Society for Optical Engineering · 2025
    Article
  5. Article
  6. Article
  7. An automatic whole-slide hyperspectral imaging microscope.Proceedings of SPIE--the International Society for Optical Engineering
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Minh Ha TranCenter for Imaging and Surgical Innovation, University of Texas at Dallas, Richardson, TX.
Ofelia GomezCenter for Imaging and Surgical Innovation, University of Texas at Dallas, Richardson, TX.
Baowei FeiCenter for Imaging and Surgical Innovation, University of Texas at Dallas, Richardson, TX.

Funding

Image-guided Intravascular Robotic System for Mitral Valve Repair and ImplantsR01HL140325 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI DESAI, JAYDEV P., FEI, BAOWEI · 2018 to 2021
$3.0M
ACADEMIC-INDUSTRIAL PARTNERSHIP FOR TRANSLATION OF PET/TRUS GUIDED INTERVENTIONR01CA204254 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2017 to 2021
$2.0M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
STAN-CT: Standardization and Normalization of CT images for Lung Cancer PatientsR21CA231911 · NCI · UNIVERSITY OF KENTUCKY · PI CHEN, JIN, FEI, BAOWEI · 2019 to 2020
$389k
NCI NIH HHS R01 CA156775NCI NIH HHS R01 CA204254NCI NIH HHS R21 CA231911NHLBI NIH HHS R01 HL140325
6 · The paper itself

Abstract

Hyperspectral imaging is a label-free and non-invasive imaging modality that seeks to capture images in different wavelengths. In this study, we used a vision transformer that was pre-trained from video data to detect thyroid cancer on hyperspectral images. We built a dataset of 49 whole slide hyperspectral images (WS-HSI) of thyroid cancer. To improve training, we introduced 5 new data augmentation methods that transform spectra. We achieved an F-1 score of 88.1% and an accuracy of 89.64% on our test dataset. The transformer network and the whole slide hyperspectral imaging technique can have many applications in digital pathology.

Indexed as

deep learningHyperspectral imagingimage classificationthyroid cancertransformer attention-based neural networkswhole-slide imaging

Identifiers

PMID38577581
PMCPMC10993530

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.