Evidence map›Paper›PMID 38577019›Full record

ArticleNon-coding RNA research2024

Noncoding RNA-associated competing endogenous RNA networks in trastuzumab-induced cardiotoxicity.

Suifen Xie, Ni Zhou, Nan Su, Zijun Xiao, Shanshan Wei, Yuanying Yang, Jian Liu, Wenqun Li, Bikui Zhang

Open access · goldAbstract read
In one paragraph

Article in Non-coding RNA research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Suifen XieDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Ni ZhouDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Nan SuDepartment of Ophthalmology, The First People's Hospital of Lanzhou City, Lanzhou, 730050, Gansu Province, China.
Zijun XiaoDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Shanshan WeiDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Yuanying YangDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Jian LiuDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Wenqun LiDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Bikui ZhangDepartment of Pharmacy, The Second Xiangya Hospital, Central South University, Changsha, Hunan, 410011, China.
Second Xiangya Hospital of Central South University · CNCentral South University · CNFirst Hospital of Lanzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trastuzumab-induced cardiotoxicity (TIC) is a common and serious disease with abnormal cardiac function. Accumulating evidence has indicated certain non-coding RNAs (ncRNAs), functioning as competing endogenous RNAs (ceRNAs), impacting the progression of cardiovascular diseases. Nonetheless, the specific involvement of ncRNA-mediated ceRNA regulatory mechanisms in TIC remains elusive. The present research aims to comprehensively investigate changes in the expressions of all ncRNA using whole-transcriptome RNA sequencing. The sequencing analysis unveiled significant dysregulation, identifying a total of 43 circular RNAs (circRNAs), 270 long noncoding RNAs (lncRNAs), 12 microRNAs (miRNAs), and 4131 mRNAs in trastuzumab-treated mouse hearts. Subsequently, circRNA-based ceRNA networks consisting of 82 nodes and 91 edges, as well as lncRNA-based ceRNA networks comprising 111 nodes and 112 edges, were constructed. Using the CytoNCA plugin, pivotal genes-miR-31-5p and miR-644-5p-were identified within these networks, exhibiting potential relevance in TIC treatment. Additionally, KEGG and GO analyses were conducted to explore the functional pathways associated with the genes within the ceRNA networks. The outcomes of the predicted ceRNAs and bioinformatics analyses elucidated the plausible involvement of ncRNAs in TIC pathogenesis. This insight contributes to a better understanding of underlying mechanisms and aids in identifying promising targets for effective prevention and treatment strategies.

Indexed as

CardiotoxicityceRNA networksNoncoding RNATrastuzumabWhole transcriptome sequencing

Identifiers

PMID38577019
PMCPMC10990741
OpenAlexW4392059489

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.