Evidence map›Paper›PMID 38575688›Full record

ArticleExtremophiles : life under extreme conditions2024

Fungal diversity present in snow sampled in summer in the north-west Antarctic Peninsula and the South Shetland Islands, Maritime Antarctica, assessed using metabarcoding.

Graciéle Cunha Alves de Menezes, Fabyano A C Lopes, Karita C R Santos, Micheline C Silva, Peter Convey, Paulo E A S Câmara, Luiz H Rosa

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Article in Extremophiles : life under extreme conditions, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Graciéle Cunha Alves de MenezesDepartamento de Microbiologia, Universidade Federal de Minas Gerais, Minas Gerais, Brazil.
Fabyano A C LopesLaboratório de Microbiologia, Universidade Federal do Tocantins, Palmas, Brazil.
Karita C R SantosLaboratório de Microbiologia, Universidade Federal do Tocantins, Palmas, Brazil.
Micheline C SilvaDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.
Peter ConveyBritish Antarctic Survey, NERC, High Cross, Cambridge, CB3 0ET, UK.
Paulo E A S CâmaraDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.
Luiz H RosaDepartamento de Microbiologia, Universidade Federal de Minas Gerais, Minas Gerais, Brazil. lhrosa@icb.ufmg.br.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We assessed the fungal diversity present in snow sampled during summer in the north-west Antarctic Peninsula and the South Shetland Islands, maritime Antarctica using a metabarcoding approach. A total of 586,693 fungal DNA reads were obtained and assigned to 203 amplicon sequence variants (ASVs). The dominant phylum was Ascomycota, followed by Basidiomycota, Mortierellomycota, Chytridiomycota and Mucoromycota. Penicillium sp., Pseudogymnoascus pannorum, Coniochaeta sp., Aspergillus sp., Antarctomyces sp., Phenoliferia sp., Cryolevonia sp., Camptobasidiaceae sp., Rhodotorula mucilaginosa and Bannozyma yamatoana were assessed as abundant taxa. The snow fungal diversity indices were high but varied across the different locations sampled. Of the fungal ASVs detected, only 28 were present all sampling locations. The 116 fungal genera detected in the snow were dominated by saprotrophic taxa, followed by symbiotrophic and pathotrophic. Our data indicate that, despite the low temperature and oligotrophic conditions, snow can host a richer mycobiome than previously reported through traditional culturing studies. The snow mycobiome includes a complex diversity dominated by cosmopolitan, cold-adapted, psychrophilic and endemic taxa. While saprophytes dominate this community, a range of other functional groups are present.

Indexed as

MycobiomeSnowAntarctic RegionsCold TemperatureDNA, FungalFungiDNA, FungalEcologyEnvironmental DNAExtremophilesFungalTaxonomy

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.