Evidence map›Paper›PMID 38573825›Full record

ArticleFEMS microbiology ecology2024

Ferriphaselus amnicola strain GF-20, a new iron- and thiosulfate-oxidizing bacterium isolated from a hard rock aquifer.

Mélissa Garry, Julien Farasin, Laetitia Drevillon, Achim Quaiser, Camille Bouchez, Tanguy Le Borgne, Sarah Coffinet, Alexis Dufresne

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. An organotrophicApplied and environmental microbiology · 2025
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mélissa GarryGéosciences Rennes, CNRS, Univ Rennes, UMR 6118, Rennes, France.ORCID 0000-0002-3065-7068
Julien FarasinOSUR, Univ Rennes, UMS 3343, Rennes, France.
Laetitia DrevillonEcobio-Ecosystèmes, Biodiversité, Evolution, CNRS, Univ Rennes, UMR 6553, Rennes, France.
Achim QuaiserEcobio-Ecosystèmes, Biodiversité, Evolution, CNRS, Univ Rennes, UMR 6553, Rennes, France.
Camille BouchezGéosciences Rennes, CNRS, Univ Rennes, UMR 6118, Rennes, France.
Tanguy Le BorgneGéosciences Rennes, CNRS, Univ Rennes, UMR 6118, Rennes, France.
Sarah CoffinetEcobio-Ecosystèmes, Biodiversité, Evolution, CNRS, Univ Rennes, UMR 6553, Rennes, France.
Alexis DufresneEcobio-Ecosystèmes, Biodiversité, Evolution, CNRS, Univ Rennes, UMR 6553, Rennes, France.

Funding

European Research Council 648377
6 · The paper itself

Abstract

Ferriphaselus amnicola GF-20 is the first Fe-oxidizing bacterium isolated from the continental subsurface. It was isolated from groundwater circulating at 20 m depth in the fractured-rock catchment observatory of Guidel-Ploemeur (France). Strain GF-20 is a neutrophilic, iron- and thiosulfate-oxidizer and grows autotrophically. The strain shows a preference for low oxygen concentrations, which suggests an adaptation to the limiting oxygen conditions of the subsurface. It produces extracellular stalks and dreads when grown with Fe(II) but does not secrete any structure when grown with thiosulfate. Phylogenetic analyses and genome comparisons revealed that strain GF-20 is affiliated with the species F. amnicola and is strikingly similar to F. amnicola strain OYT1, which was isolated from a groundwater seep in Japan. Based on the phenotypic and phylogenetic characteristics, we propose that GF-20 represents a new strain within the species F. amnicola.

Indexed as

GroundwaterIronOxidation-ReductionPhylogenyRNA, Ribosomal, 16SThiosulfatesBacteroidetesDNA, BacterialFranceGenome, BacterialSequence Analysis, DNADNA, BacterialIronRNA, Ribosomal, 16SThiosulfateschemolithoautotrophiccontinental subsurfaceFerriphaselusiron oxidationlow-oxygenthiosulfate-oxidation

Identifiers

PMID38573825
PMCPMC11044966

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.