Evidence map›Paper›PMID 38569056›Full record

ArticleGenetics and molecular biology2024

Horizontal transfer and the widespread presence of Galileo transposons in Drosophilidae (Insecta: Diptera).

Henrique R M Antoniolli, Sebastián Pita, Maríndia Deprá, Vera L S Valente

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Article in Genetics and molecular biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Henrique R M AntoniolliUniversidade Federal do Rio Grande do Sul (UFRGS), Laboratório de Drosophila, Programa de Pós-Graduação em Genética e Biologia Molecular, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0002-6747-3641
Sebastián PitaUniversidad de la República (UdelaR), Facultad de Ciencias, Sección Genética Evolutiva, Montevideo, Uruguay.ORCID http://orcid.org/0000-0002-4102-5808
Maríndia DepráUniversidade Federal do Rio Grande do Sul (UFRGS), Laboratório de Drosophila, Programa de Pós-Graduação em Genética e Biologia Molecular, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0003-4568-1869
Vera L S ValenteUniversidade Federal do Rio Grande do Sul (UFRGS), Laboratório de Drosophila, Programa de Pós-Graduação em Genética e Biologia Molecular, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0001-8661-6284
Universidade Federal do Rio Grande do Sul · BRUniversidad de la República de Uruguay · UY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Galileo is a transposon notoriously involved with inversions in Drosophila buzzatii by ectopic recombination. Although widespread in Drosophila, little is known about this transposon in other lineages of Drosophilidae. Here, the abundance of the canonical Galileo and its evolutionary history in Drosophilidae genomes was estimated and reconstructed across genera within its two subfamilies. Sequences of this transposon were masked in these genomes and their transposase sequences were recovered using BLASTn. Phylogenetic analyses were employed to reconstruct their evolutionary history and compare it to that of host genomes. Galileo was found in nearly all 163 species, however, only 37 harbored nearly complete transposase sequences. In the remaining, Galileo was found highly fragmented. Copies from related species were clustered, however horizontal transfer events were detected between the melanogaster and montium groups of Drosophila, and between the latter and the Lordiphosa genus. The similarity of sequences found in the virilis and willistoni groups of Drosophila was found to be a consequence of lineage sorting. Therefore, the evolution of Galileo is primarily marked by vertical transmission and long-term inactivation, mainly through the deletion of open reading frames. The latter has the potential to lead copies of this transposon to become miniature inverted-repeat transposable elements.

Identifiers

PMID38569056
PMCPMC10990002
OpenAlexW4393309487

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.