Evidence map›Paper›PMID 38568414›Full record

ArticleJournal of applied genetics2024

The use of SNP markers for cattle breed identification.

Igor Jasielczuk, Artur Gurgul, Tomasz Szmatoła, Anna Radko, Anna Majewska, Ewa Sosin, Zygmunt Litwińczuk, Dominika Rubiś, Tomasz Ząbek

Abstract read
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In one paragraph

Article in Journal of applied genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Igor JasielczukCenter for Experimental and Innovative Medicine, University of Agriculture in Krakow, Rędzina 1C, 30-248, Kraków, Poland. igor.jasielczuk@urk.edu.pl.ORCID http://orcid.org/0000-0001-8583-3850
Artur GurgulCenter for Experimental and Innovative Medicine, University of Agriculture in Krakow, Rędzina 1C, 30-248, Kraków, Poland.ORCID http://orcid.org/0000-0001-5979-144X
Tomasz SzmatołaCenter for Experimental and Innovative Medicine, University of Agriculture in Krakow, Rędzina 1C, 30-248, Kraków, Poland.ORCID http://orcid.org/0000-0003-1588-4198
Anna RadkoDepartment of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.ORCID http://orcid.org/0000-0003-0205-235X
Anna MajewskaDepartment of Cattle Breeding, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.ORCID http://orcid.org/0000-0002-9391-1633
Ewa SosinDepartment of Animal Nutrition and Feed Science, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.ORCID http://orcid.org/0000-0001-5304-972X
Zygmunt LitwińczukSub-Department of Cattle Breeding and Genetic Resources Conservation, University of Life Sciences in Lublin, Akademicka 13, 20-950, Lublin, Poland.ORCID http://orcid.org/0000-0003-0003-1862
Dominika RubiśDepartment of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.ORCID http://orcid.org/0000-0002-9010-0771
Tomasz ZąbekDepartment of Animal Molecular Biology, National Research Institute of Animal Production, Krakowska 1, 32-083, Balice, Poland.ORCID http://orcid.org/0000-0002-9795-3232
National Research Institute of Animal Production · PLUniversity of Agriculture in Krakow · PLUniversity of Life Sciences in Lublin · PL

Funding

Narodowe Centrum Badań i Rozwoju BIOSTRATEG2/297267/14/NCBR/2016
6 · The paper itself

Abstract

A potential application of single nucleotide polymorphisms (SNPs) in animal husbandry and production is identification of the animal breed. In this study, using chosen marker selection methods and genotypic data obtained with the use of Illumina Bovine SNP50 BeadChip for individuals belonging to ten cattle breeds, the reduced panels containing the most informative SNP markers were developed. The suitability of selected SNP panels for the effective and reliable assignment of the studied individuals to the breed of origin was checked by three allocation algorithms implemented in GeneClass 2. The studied breeds set included both Polish-native breeds under the genetic resources conservation programs and highly productive breeds with a global range. For all of the tested marker selection methods ("delta" and two F

Indexed as

BreedingGenotypePolymorphism, Single NucleotideAlgorithmsAnimalsCattleGenetic MarkersGenetics, PopulationOligonucleotide Array Sequence AnalysisPolandGenetic MarkersBos TaurusBreed assignmentGenetic diversityNative breedsPopulation structure

Identifiers

PMID38568414
OpenAlexW4393902611

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.