Evidence map›Paper›PMID 38568199›Full record

ArticleMicrobial genomics2024

Investigating the impact of insertion sequences and transposons in the genomes of the most significant phytopathogenic bacteria.

Alexia Suellen Fernandes, Kiara França Campos, Jéssica Catarine Silva de Assis, Osiel Silva Gonçalves, Marisa Vieira de Queiroz, Denise Mara Soares Bazzolli, Mateus Ferreira Santana

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

  1. Genome Evolution in Plant Pathogenic Bacteria.Genome biology and evolution · 2026
    Review
  2. Review
  3. Transposase-Associated Variation nearPathogens (Basel, Switzerland) · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Pathogenomic Insights intoLife (Basel, Switzerland) · 2024
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Alexia Suellen FernandesDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Kiara França CamposDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Jéssica Catarine Silva de AssisDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Osiel Silva GonçalvesDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Marisa Vieira de QueirozDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Denise Mara Soares BazzolliDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Mateus Ferreira SantanaDepartment of Microbiology, Federal University of Viçosa, Viçosa, Brazil.
Universidade Federal de Viçosa · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic variability in phytopathogens is one of the main problems encountered for effective plant disease control. This fact may be related to the presence of transposable elements (TEs), but little is known about their role in host genomes. Here, we performed the most comprehensive analysis of insertion sequences (ISs) and transposons (Tns) in the genomes of the most important bacterial plant pathogens. A total of 35 692 ISs and 71 transposons were identified in 270 complete genomes. The level of pathogen-host specialization was found to be a significant determinant of the element distribution among the species. Some Tns were identified as carrying virulence factors, such as genes encoding effector proteins of the type III secretion system and resistance genes for the antimicrobial streptomycin. Evidence for IS-mediated ectopic recombination was identified in

Indexed as

DNA Transposable ElementsRNA, Small UntranslatedBacteriaGene Expression ProfilingHost SpecificityPlant DiseasesDNA Transposable ElementsRNA, Small Untranslatedphytopathogenstransposable genetic elementsvirulence and genome evolution

Identifiers

PMID38568199
PMCPMC11092175
OpenAlexW4393899111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.