Evidence map›Paper›PMID 38566427›Full record

ArticleSe pu = Chinese journal of chromatography2024

[Hologram quantitative structure-activity relationship on the gas chromatographic retention index of plant essential oil constituents].

Rui Guo, Long Jiao, Zubiao Hu, Qingchen Wang, Hanbin Zhong, Mingli Jing

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Article in Se pu = Chinese journal of chromatography, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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6 authors.

Rui Guo1. College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China.
Long Jiao1. College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China.
Zubiao Hu2. Changqing General Drilling Company, CNPC Chuanqing Drilling Engineering Co. Ltd., Xi'an 710016, China.
Qingchen Wang2. Changqing General Drilling Company, CNPC Chuanqing Drilling Engineering Co. Ltd., Xi'an 710016, China.
Hanbin Zhong1. College of Chemistry and Chemical Engineering, Xi'an Shiyou University, Xi'an 710065, China.
Mingli Jing3. School of Electronic Engineering, Xi'an Shiyou University, Xi'an 710065, China.

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6 · The paper itself

Abstract

The gas chromatography retention index (RI) is an important parameter for the identification of different types of compounds in the field of chromatographic analysis; however, the experimental collection of RI values is a extremely cumbersome process. Thus, there is an urgent need for the establishment of a simple, efficient, and accurate model for the prediction of the RI values of compounds. In this study, first, the experimental RI values for 60 plant essential oil constituents were obtained. Next, a model describing the hologram quantitative structure-activity relationship (HQSAR) between the structural properties of the essential oil constituents and their RI values was investigated and constructed. The optimal HQSAR model was established by setting the model parameters "fragment size", "fragment distinction", "hologram length" and "principal components" to "1-4", "C, Ch", "199", and "4", respectively. Finally, the predictive ability of the model was verified using external test set validation and leave-one-out cross-validation (LOO-CV). The experimental results were as follows, the root mean square error of prediction (RMSEP), predictive determination coefficient ([Formula: see text]), concordance correlation coefficient (CCC), and mean relative error (MRE) for external test set validation were 40.45, 0.984, 0.968, and 2.20%, respectively. Meanwhile, the root mean square error of cross validation (RMSECV) and MRE for LOO-CV were 72.56 and 4.17%, respectively. These findings demonstrate that the established HQSAR model has a good predictive ability and can accurately predict the RI values of plant essential oil constituents. In addition, the molecular contribution maps of the HQSAR model revealed that the RI values of aromatic compounds increase when hydroxyl groups are connected to their alkyl chains. Aliphatic compounds feature long chain alkyl groups, which can lead to an increase in RI values. The above phenomena highlight the promising application prospects of HQSAR for studying the RI values of plant essential oil constituents. Therefore, this study provides a reliable theoretical basis for predicting the RI values of other essential oil constituents.

Indexed as

gas chromatographic retention indexhologram quantitative structure-activity relationship (HQSAR)molecular contribution mapplant essential oil

Identifiers

PMID38566427
PMCPMC10988569

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