Evidence map›Paper›PMID 38565640›Full record

ArticleEuropean journal of human genetics : EJHG2024

A framework for the evaluation and reporting of incidental findings in clinical genomic testing.

Carolyn M Brown, Laura M Amendola, Anjana Chandrasekhar, R Tanner Hagelstrom, Gillian Halter, Akanchha Kesari, Erin Thorpe, Denise L Perry, Ryan J Taft, Alison J Coffey

Abstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Carolyn M BrownMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA. carolynm.brown26@gmail.com.ORCID 0000-0003-4587-0002
Laura M Amendola *Medical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
Anjana Chandrasekhar *Medical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
R Tanner HagelstromOncology, Natera Inc., Austin, TX, 78753, USA.
Gillian HalterScripps MD Anderson Cancer Center, San Diego, CA, 92121, USA.
Akanchha KesariMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
Erin ThorpeMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
Denise L PerryMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
Ryan J TaftMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA.
Alison J CoffeyMedical Genomics Research, Illumina, Inc., San Diego, CA, 92122, USA. acoffey@illumina.com.ORCID 0000-0002-1338-8513

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Currently, there are no widely accepted recommendations in the genomics field guiding the return of incidental findings (IFs), defined here as unexpected results that are unrelated to the indication for testing. Consequently, reporting policies for IFs among laboratories offering genomic testing are variable and may lack transparency. Herein we describe a framework developed to guide the evaluation and return of IFs encountered in probands undergoing clinical genome sequencing (cGS). The framework prioritizes clinical significance and actionability of IFs and follows a stepwise approach with stopping points at which IFs may be recommended for return or not. Over 18 months, implementation of the framework in a clinical laboratory facilitated the return of actionable IFs in 37 of 720 (5.1%) individuals referred for cGS, which is reduced to 3.1% if glucose-6-phosphate dehydrogenase (G6PD) deficiency is excluded. This framework can serve as a model to standardize reporting of IFs identified during genomic testing.

Indexed as

Genetic TestingIncidental FindingsGenomicsHumans

Identifiers

PMID38565640
PMCPMC11153510

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.