Evidence map›Paper›PMID 38563788›Full record

ArticleMicrobiology spectrum2024

Genomic analysis of

Jirachaya Toyting, Narong Nuanmuang, Fuangfa Utrarachkij, Neunghatai Supha, Yuwanda Thongpanich, Pimlapas Leekitcharoenphon, Frank M Aarestrup, Toyotaka Sato, Jeewan Thapa, Chie Nakajima and 1 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Genomic Epidemiology ofChina CDC weekly · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Comparative Genomic and Phylogenetic Analysis ofTransboundary and emerging diseases · 2025
    Article
  7. DoesInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Jirachaya ToytingDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.ORCID 0009-0001-6083-8767
Narong NuanmuangResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark.
Fuangfa UtrarachkijDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
Neunghatai SuphaDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
Yuwanda ThongpanichDepartment of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
Pimlapas LeekitcharoenphonResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark.ORCID 0000-0002-5674-0142
Frank M AarestrupResearch Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark.ORCID 0000-0002-7116-2723
Toyotaka SatoLaboratory of Veterinary Hygiene, Faculty of Veterinary Medicine, Hokkaido University, Sapporo, Japan.ORCID 0000-0001-7223-1623
Jeewan ThapaDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.ORCID 0000-0002-3447-6483
Chie NakajimaDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.
Yasuhiko SuzukiDivision of Bioresources, Hokkaido University International Institute for Zoonosis Control, Sapporo, Japan.ORCID 0000-0002-1313-1494
Hokkaido University · JPMahidol University · THTechnical University of Denmark · DKSapporo University · JP

Funding

Japan Agency for Medical Research and Development (AMED) JP20ak0101118, JP23ama121039, 23gm1610012Japan Agency for Medical Research and Development (AMED) JP23wm0125008, JP233fa627005MEXT | Japan Society for the Promotion of Science (JSPS) 22K0599902MEXT | Japan Society for the Promotion of Science (JSPS) JP21H03622, JP22K19416MEXT | JST | Science and Technology Research Partnership for Sustainable Development (SATREPS) ST211004JOMinistry of Health, Labour and Welfare (MHLW) 23HA2010
6 · The paper itself

Abstract

Antimicrobial resistance (AMR) poses an escalating global public health threat. Canals are essential in Thailand, including the capital city, Bangkok, as agricultural and daily water sources. However, the characteristic and antimicrobial-resistance properties of the bacteria in the urban canals have never been elucidated. This study employed whole genome sequencing to characterize 30 genomes of a causal pathogenic bacteria,

Indexed as

Anti-Bacterial AgentsDrug Resistance, Multiple, BacterialGenome, BacterialVirulence FactorsWhole Genome SequencingGenomicsHumansMicrobial Sensitivity TestsPhylogenyPlasmidsSalmonellaSalmonella entericaSalmonella InfectionsSerogroupThailandWater MicrobiologyAnti-Bacterial AgentsVirulence Factorscanaldrug resistance mechanismsgenome analysisSalmonellawaterborne pathogens

Identifiers

PMID38563788
PMCPMC11064549
OpenAlexW4393433624

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.