Evidence map›Paper›PMID 38562899›Full record

ArticlebioRxiv : the preprint server for biology2025

SMAdd-seq: Probing chromatin accessibility with small molecule DNA intercalation and nanopore sequencing.

Gali Bai, Namrita Dhillon, Colette Felton, Brett Meissner, Brandon Saint-John, Robert Shelansky, Elliot Meyerson, Eva Hrabeta-Robinson, Babak Hodjat, Hinrich Boeger and 1 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Gali BaiDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Namrita DhillonDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.ORCID 0009-0008-0042-2074
Colette FeltonDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Brett MeissnerDepartment of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Brandon Saint-JohnDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Robert ShelanskyDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Elliot MeyersonCognizant AI Labs, San Francisco, California, 94105, United States of America.
Eva Hrabeta-RobinsonDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.
Babak HodjatCognizant AI Labs, San Francisco, California, 94105, United States of America.
Hinrich BoegerDepartment of Molecular, Cell, and Developmental Biology, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.ORCID 0000-0001-9933-8551
Angela N BrooksDepartment of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, California, 95064, United States of America.ORCID 0000-0002-7898-3073
University of California, Santa Cruz · USCognizant (United States) · US

Funding

Novel approaches to improve comprehensive profiling of the epigenome and epitranscriptomeR35GM138122 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Angela Norie Brooks · 2020 to 2026
$2.8M
UC Santa Cruz Training Program In Genomic SciencesT32HG008345 · NHGRI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI BROOKS, ANGELA NORIE, GREEN, RICHARD EDWARD · 2015 to 2020
$1.4M
NHGRI NIH HHS T32 HG008345NIGMS NIH HHS R35 GM138122
6 · The paper itself

Abstract

Studies of

Identifiers

PMID38562899
PMCPMC10983977
OpenAlexW4393117871

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.