Evidence map›Paper›PMID 38562748›Full record

ArticlebioRxiv : the preprint server for biology2024

Analysis and culturing of the prototypic crAssphage reveals a phage-plasmid lifestyle.

Danica T Schmidtke, Angela S Hickey, Ivan Liachko, Gavin Sherlock, Ami S Bhatt

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Danica T SchmidtkeDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, USA.ORCID 0000-0001-9509-6188
Angela S HickeyDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID 0000-0003-4407-6894
Ivan LiachkoPhase Genomics, Seattle, WA, USA.ORCID 0000-0001-6972-6705
Gavin SherlockDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID 0000-0002-1692-4983
Ami S BhattDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID 0000-0001-8099-2975

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
Multisizer 4e - equipment for "Fitness Effects of Beneficial Mutations"R35GM131824 · NIGMS · STANFORD UNIVERSITY · PI Gavin J Sherlock · 2019 to 2026
$3.6M
Culture-free pathogen tracking in hospitalized patientsR01AI143757 · NIAID · STANFORD UNIVERSITY · PI BHATT, AMI SIDDHARTH · 2020 to 2023
$3.0M
Therapeutic phage host-range prediction using proximity-guided metagenomics and artificial intelligenceR44AI172703 · NIAID · PHASE GENOMICS, INC. · PI LIACHKO, IVAN · 2022 to 2023
$2.0M
Emerging novel mechanisms of antibiotic resistance in the prevalent foodborne pathogen, SalmonellaR01AI148623 · NIAID · STANFORD UNIVERSITY · PI BHATT, AMI SIDDHARTH · 2019 to 2023
$2.0M
A method for the culture-free discovery and host affiliation of novel viruses from metagenomic samplesR44AI162570 · NIAID · PHASE GENOMICS, INC. · PI LIACHKO, IVAN · 2021 to 2022
$1.6M
NIAID NIH HHS R01 AI143757NIAID NIH HHS R01 AI148623NIAID NIH HHS R44 AI162570NIAID NIH HHS R44 AI172703NIGMS NIH HHS R35 GM131824NIGMS NIH HHS T32 GM007276
6 · The paper itself

Abstract

The prototypic crAssphage (

Indexed as

bacteriophageBacteroidotaCarjivirus communiscrAssphagemicrobiomephage-plasmidPhocaeicolaplasmid

Identifiers

PMID38562748
PMCPMC10983915

What OpenQuestion holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.